Design.write_scadnano_file has the warn_duplicate_strand_names argument that suppresses warnings about duplicate strand names. Design.read_scadnano_file does not, which causes problems for tile systems.
I actually wonder whether it might make sense to have the duplicate strand name check function check to see if the two identically-named strands could be copies of the same strand, eg, have the same sequence, and not warn if that's the case? This would mostly remove the need for the warn_duplicate_strand_names=False possibility for tile systems.
Design.write_scadnano_filehas thewarn_duplicate_strand_namesargument that suppresses warnings about duplicate strand names.Design.read_scadnano_filedoes not, which causes problems for tile systems.I actually wonder whether it might make sense to have the duplicate strand name check function check to see if the two identically-named strands could be copies of the same strand, eg, have the same sequence, and not warn if that's the case? This would mostly remove the need for the warn_duplicate_strand_names=False possibility for tile systems.