Use miniforge base image and install only required FSL packages

UCL-ARC / Enigma-PD-WML

Segment White Mater Lesions (WML) in T1-weighted and FLAIR MRI images using FSL and U-Net

BSD 3-Clause "New" or "Revised" License

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Use miniforge base image and install only required FSL packages #9

Open p-j-smith opened 2 months ago

p-j-smith commented 2 months ago

Motivation

The image we're building is quite large (>10GB) and takes several minutes to install FSL. It would be good to reduce the image size and speed up build times.

Pitch

[ ] Use the miniforge image as the base image
[ ] Use conda to install only the FSL packages needed for the analysis

Alternatives

No response

Additional context

No response