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UCL-Chimera / bellerophon

data flows
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SOP for linking OMOP-ES type data and machine data #31

Open docsteveharris opened 1 year ago

docsteveharris commented 1 year ago

We will need to merge data from the EHR with data from other sources (machines, images etc). We will need to do that merge before we anonymise and export. Tim Roberts has a method already in place for working with accession numbers in images.

docsteveharris commented 1 year ago

Steve to pick up in conversation with Tim R esp using the ventilation/CPET data examples

docsteveharris commented 1 year ago

We will tackle this in the 100-day, and use that learning here

skeating commented 1 year ago

I have contacted Tim Roberts about linking in case we don't get far enough with the 100 Day Project. The types of data are to be linked are very different

skeating commented 11 months ago

There is now private data that is part of the omop extract that links the person_ id to the MRN. This would not be exported when delivering data to a client, but since we are querying the database directly we do have access to this table.