search

UCL / HHyeast-server

0 stars 0 forks source link

Create zip files for download #44

Open ilectra opened 6 years ago

ilectra commented 6 years ago

For each ORF, the main search and gap search result files should be tarred-up (or zipped, whatever) and put on the server for download.

tamuri commented 6 years ago

Need to clarify with Tim whether to do this or not yet.

timlevine commented 6 years ago

I'd like to see some (or several) of the gap files.but in principal yes.

Tim

From: Asif Tamuri notifications@github.com Sent: Wednesday, July 18, 2018 11:53:28 AM To: UCL/HHyeast-server Cc: Subscribed Subject: Re: [UCL/HHyeast-server] Create zip files for download (#44)

Need to clarify with Tim whether to do this or not yet.

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHubhttps://github.com/UCL/HHyeast-server/issues/44#issuecomment-405891508, or mute the threadhttps://github.com/notifications/unsubscribe-auth/AM5sGNrP6BFcOA15QAZJOxsCHQY1e8D-ks5uHxOogaJpZM4Tf5Pf.

tamuri commented 6 years ago

Depends on https://github.com/UCL/HHprY-Project/issues/24

tamuri commented 6 years ago

Zip files for each ORF hhsearch result (inc. low confidence regions) are in /rd/live/ritd-ag-project-rd005i-tplev57/zipped-20180720. Total size is 16GB, 6713 files.

timlevine commented 6 years ago

Will it be possible for the user to tell if there is a gap file for any one ORF, or will they have to work it out by downloading and unzipping?

timlevine commented 6 years ago

I'm trying to log in on a different computer from the one you helped me set up with cyberduck last week. I have hardly any idea about the settings for the connection WebDAV (HTTPS) ? or go for HTTP Server: ????? username: smgxtpl (I assume)

SSH private key : none?

tamuri commented 6 years ago
timlevine commented 6 years ago

great stuff. I have the files - and I discovered "unzip *.zip" to unzip them all.

Tim

timlevine commented 6 years ago

that worked well