Improve CRH HTML and options

UCLOrengoGroup / cath-tools

Protein structure comparison tools such as SSAP and SNAP

http://cath-tools.readthedocs.io

GNU General Public License v3.0

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Closed tonyelewis closed 7 years ago

tonyelewis commented 7 years ago

Jon and I think these options would be useful...

In HTML output, add a single-line result to CRH

Add a new block of HTML options with these two options:

--html-max-num-non-soln-hits <num> In HTML output, only display up to <num> hits that aren't part of the solution
--html-exclude-rejected-hits In HTML output, don't display hits that fail the score filters

tonyelewis commented 7 years ago

Whilst making these changes, move the --restrict-html-within-body option to the new HTML options block.

tonyelewis commented 7 years ago

Also:

abstract [...].get_generate_html_output() || [...].get_restrict_html_within_body() logic out of make_hits_processor() into separate new bool implies_html(const crh_output_spec &); function.
make crh_options enforce that an HTML options_block option can only be specified if implies_html() is false