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UCLouvain-CBIO / scp

Single cell proteomics data processing
https://uclouvain-cbio.github.io/scp/index.html
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vignette: use `robustSummary` instead of `colMeans` when aggregtating features #15

Open cvanderaa opened 4 years ago

cvanderaa commented 4 years ago

I need to aggregate PSMs -> peptides and peptides -> proteins

@lgatto from reading the documentation I understand I need to log transform the PSM intensities before aggregation with robustSummary right?