Feature request: create a Shiny app - Githubissues

UCLouvain-CBIO / scp

Single cell proteomics data processing

https://uclouvain-cbio.github.io/scp/index.html

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Feature request: create a Shiny app #29

Open cvanderaa opened 3 years ago

cvanderaa commented 3 years ago

As requested by the Slavov lab.

A concern for new users is 'will my data work with scp'? Lower that barrier is essential! GUIs can be a good way to address that.

[ ] Create shiny interface (package?),at least to load data into a QFeatures object
[ ] Possibly some simple dim reduction features (cf iSEE)
[ ] Explore data using the links between PSMs -> peptides - > proteins
[ ] QC applications (and their implication on dimension reduction)

lgatto commented 7 months ago

See https://github.com/UCLouvain-CBIO/scpGUI