Installation issues

[lgatto]

> BiocManager::install("UCLouvain-CBIO/scpdata")
Bioconductor version 3.13 (BiocManager 1.30.10), R Under development (unstable)
  (2020-12-10 r79607)
Installing github package(s) 'UCLouvain-CBIO/scpdata'
Using github PAT from envvar GITHUB_PAT
Downloading GitHub repo UCLouvain-CBIO/scpdata@HEAD
✔  checking for file ‘/tmp/RtmpnyJjv9/remotes1f8d6d1aeeaf7/UCLouvain-CBIO-scpdata-9468afd/DESCRIPTION’
─  preparing ‘scpdata’:
✔  checking DESCRIPTION meta-information
─  checking for LF line-endings in source and make files and shell scripts
─  checking for empty or unneeded directories
─  building ‘scpdata_0.99.0.tar.gz’

* installing *source* package ‘scpdata’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning in file(file, "rt") :
  file("") only supports open = "w+" and open = "w+b": using the former
Error: package or namespace load failed for ‘scpdata’:
 .onLoad failed in loadNamespace() for 'scpdata', details:
  call: read.table(file = file, header = header, sep = sep, quote = quote, 
  error: no lines available in input
Error: loading failed
Execution halted
ERROR: loading failed
* removing ‘/home/lgatto/R/x86_64-pc-linux-gnu-library/4.1/scpdata’
Error: Failed to install 'scpdata' from GitHub:
  (converted from warning) installation of package ‘/tmp/RtmpnyJjv9/file1f8d6d7e1ef644/scpdata_0.99.0.tar.gz’ had non-zero exit status

> sessionInfo()
R Under development (unstable) (2020-12-10 r79607)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Manjaro Linux

Matrix products: default
BLAS:   /usr/lib/libblas.so.3.9.0
LAPACK: /usr/lib/liblapack.so.3.9.0

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C              
 [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
 [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
 [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                 
 [9] LC_ADDRESS=C               LC_TELEPHONE=C            
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] BiocManager_1.30.10

loaded via a namespace (and not attached):
 [1] ps_1.5.0          fansi_0.4.1       prettyunits_1.1.1 withr_2.3.0      
 [5] rprojroot_2.0.2   crayon_1.3.4      assertthat_0.2.1  R6_2.5.0         
 [9] cli_2.2.0         curl_4.3          remotes_2.2.0     callr_3.5.1      
[13] tools_4.1.0       glue_1.4.2        compiler_4.1.0    processx_3.4.5   
[17] pkgbuild_1.2.0   

[cvanderaa]

It should be working now! My local and the remote .Rbuildignore files were not synchronized...

[lgatto]

Yes, thanks!