submodule runLenthMatrix for homopolymer concordance evaluation

UCSC-nanopore-cgl / margin

MIT License

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submodule runLenthMatrix for homopolymer concordance evaluation #12

Open justdx opened 2 years ago

justdx commented 2 years ago

Hi, I would like to evalutate the homopolymer concordance with reference to the method of Mc Cartney, et cl., 2022, where they used Margin's runLengthMatrix submodule to convert the assembly sequence to a run-length encoded (RLE) sequence. However, I can't find it. I wonder if this module is still available?

justdx commented 2 years ago

Sorry, I just found it in "build". Anyway, thanks for developing this nice tool.