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UCSC-nanopore-cgl / nanopore-RNN

Collaboration repository with Nanopore Group
MIT License
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Variable batch size #38

Closed adbailey4 closed 7 years ago

adbailey4 commented 7 years ago

make variable batch size and sequence length possible when loading and using a saved network

run_nanotensor.py - added another option to run very expensive operations for keeping track of timed operations nanotensor1.config.json - added boolean option "profile"

Trying out some configurations to get codecov to update to slack and some minor installation updates to the README.md

codecov[bot] commented 7 years ago

Codecov Report

Merging #38 into master will decrease coverage by 0.13%. The diff coverage is 0%.

Impacted file tree graph

@@            Coverage Diff             @@
##           master      #38      +/-   ##
==========================================
- Coverage   16.75%   16.62%   -0.14%     
==========================================
  Files           9        9              
  Lines        1074     1083       +9     
==========================================
  Hits          180      180              
- Misses        894      903       +9
Impacted Files Coverage Δ
nanotensor/data.py 0% <ø> (ø) :arrow_up:
nanotensor/network.py 0% <0%> (ø) :arrow_up:
nanotensor/run_nanotensor.py 0% <0%> (ø) :arrow_up:

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