Alignment

[ghost]

An incredible number of changes from the master branch.

Too many things to cover but branches will be merged much quicker from now on.

Main differences are a move away from event based sequencing to signal. New labeled data structure. maximum expected accuracy alignment from SignalAlign event detection from Pypore and nanonet

[codecov[bot]]

Codecov Report

Merging #48 into master will decrease coverage by 5.32%. The diff coverage is 65.13%.

@@            Coverage Diff             @@
##           master      #48      +/-   ##
==========================================
- Coverage   67.15%   61.82%   -5.33%     
==========================================
  Files           9        7       -2     
  Lines        1306     1881     +575     
==========================================
+ Hits          877     1163     +286     
- Misses        429      718     +289

Impacted Files	Coverage Δ
nanotensor/utils.py	34.74% <33.33%> (-16.53%)	:arrow_down:
nanotensor/alignedsignal.py	43.31% <43.31%> (ø)
nanotensor/fast5.py	47.12% <47.12%> (ø)
nanotensor/event_detection.py	86.27% <86.27%> (ø)
nanotensor/mea_algorithm.py	93.29% <93.29%> (ø)
nanotensor/error.py	51.85% <0%> (-7.41%)	:arrow_down:
nanotensor/signalAlign-utils.py
... and 2 more

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[ghost]

Merging even though code coverage is lower than before. Need to start tracking work from master branch again.