option to run cellranger 7, or include-introns for older version

UCSF-DSCOLAB / data_processing_pipelines

A repository to store the existing pipelines to process the various CoLabs datasets

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option to run cellranger 7, or include-introns for older version #27

Open erflynn opened 12 months ago

erflynn commented 12 months ago

include-introns needed for snRNA-seq, and we should switch to cr7 (which defaults to this for all data) but need this as an option for backwards compatibility