Open erflynn opened 10 months ago
@amadeovezz -- can you check that these additions to the pre_qc file follow conventions you have set up for channels? would love feedback on this.
@erflynn granted my hotfix testing PR works (and the subsequently merged in). Do you want to try and adding a test cases for this? Seems like a good candidate.
@amadeovezz -- can you check that these additions to the pre_qc file follow conventions you have set up for channels? would love feedback on this.
ya i was actually looking at the channel logic, i think we can refactor it to make it simpler.
Addresses #23
Adds optional function to run gtcheck to compare reference vcf and freemuxlet output.