the pipeline was still publishing artifacts to /krummellab/data1/integration_test_user/tutorial_lib_sep/. This PR explicitly forces all tests to use the absolute path of the meta directory (isolated testing environment).
How to test:
cd into single_cell_RNAseq
/krummellab/data1/software/bin/nf-test test tests/pipeline_pre_qc.nf.test --without-trace
erflynn
commented
9 months ago
the pipeline was still publishing artifacts to
/krummellab/data1/integration_test_user/tutorial_lib_sep/. This PR explicitly forces all tests to use the absolute path of the meta directory (isolated testing environment).How to test: