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UCSF-DSCOLAB / data_processing_pipelines

A repository to store the existing pipelines to process the various CoLabs datasets
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fixed bug in calculation for doublet stat .csv #81

Closed erflynn closed 1 month ago

erflynn commented 2 months ago

one-line fix to address bug in doublet_counts.csv that @syellamilli identified

erflynn commented 2 months ago

@dtm2451 tagging you b/c it may affect your work. Some of the doublet calculations are wrong in the doublet_count.csv. They are still in the doublet_stat.RDS. I recommend just deleting these .csvs.

erflynn commented 1 month ago

from more investigation with @syellamilli, it appears this was introduced in commit 4e1e4d3 but not caught until now. will run a couple more comparisons to confirm this is fixed before submitting PR

erflynn commented 1 month ago

comparisons done, and output confirmed. I would like to merge this in ASAP if folks are ok with