Would be nice to offer a switch to output AFNI variants of L2 & L3 outputs (utilizing the combine_feat_l3_to_afni and the l2 variant) within either setup_glm_pipeline or the L2/L3 model setup commands. This would save the user having to run these commands themselves post-analysis when they know they want AFNI outputs in advance.
Conceptually this probably fits better into setup_glm_pipeline, but I could see it being a parameter of build_l2/3_model as well.
Would be nice to offer a switch to output AFNI variants of L2 & L3 outputs (utilizing the
combine_feat_l3_to_afniand the l2 variant) within eithersetup_glm_pipelineor the L2/L3 model setup commands. This would save the user having to run these commands themselves post-analysis when they know they want AFNI outputs in advance.Conceptually this probably fits better into
setup_glm_pipeline, but I could see it being a parameter ofbuild_l2/3_modelas well.