UNR-CFB / lahontan

Lahontan: a flexible, multiscale RNA-seq pipeline
GNU General Public License v3.0
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better strand check logic #7

Open rltillett opened 8 years ago

rltillett commented 8 years ago

best to check and report pairwise strands per pair of reads

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it involves a few tricks to safely get from 2 raw blastn --outfmt '6 std sstrand' outputs to this, so its a bit easier than it sounds.