Open DrSpringy opened 2 years ago
has this been thoroughly tested?
JS, NC, ND, ME zoom call on 20-Mar-2024:
Nick/James to test cudadecon, open CRM ticket if bugs found
Update to allow users to select from available decon tools: eg. Microvolution, cudadecon, Huygens, and admin to set default tool should be straightforward (assign to 2H2024 project)
We need to provide an alternative open source deconvolution option for places that don’t have access to microvolution It could possibly use the same deconvolution GUI we have now, but allow the user to select which deconvolution engine to use? This would need to be done before setting deconvolution parameters as some microvolution features may be disabled such as
https://github.com/scopetools/cudaDecon https://github.com/tlambert03/pycudadecon https://www.sciencedirect.com/science/article/pii/S1046202316305096 https://www.researchgate.net/publication/312099578_DeconvolutionLab2_An_Open-Source_Software_for_Deconvolution_Microscopy https://www.degruyter.com/document/doi/10.1515/bams-2020-0027/html