Closed briandrawert closed 11 years ago
update, a fix to urdme_compile(), now the error is this:
??? Reference to non-existent field 'comsol'.
Error in ==> urdme2comsol at 102 xmesh = meshextend(umod.comsol);
Error in ==> urdme at 299 umod = urdme2comsol(umod,data.U,umod.tspan,opts.verbose);
Error in ==> annihilation_run at 9 umod = urdme(umod,@annihilation);
==================================================\=================================================
annihilation_run Compiling solver... using: /Users/brian/Desktop/research/urdme-github//build/Makefile.nsm ??? Reference to non-existent field 'urdme'.
Error in ==> urdme_compile at 134 elseif(isfield(fem.urdme,'M1')) % inline propensities specified
Error in ==> urdme at 256 umod = urdme_compile(umod,model_name,opts.propensities,opts.solver,opts.verbose);
update, a fix to urdme_compile(), now the error is this:
??? Reference to non-existent field 'comsol'.
Error in ==> urdme2comsol at 102 xmesh = meshextend(umod.comsol);
Error in ==> urdme at 299 umod = urdme2comsol(umod,data.U,umod.tspan,opts.verbose);
Error in ==> annihilation_run at 9 umod = urdme(umod,@annihilation);
==================================================\=================================================
Error in ==> urdme_compile at 134 elseif(isfield(fem.urdme,'M1')) % inline propensities specified
Error in ==> urdme at 256 umod = urdme_compile(umod,model_name,opts.propensities,opts.solver,opts.verbose);
Error in ==> annihilation_run at 9 umod = urdme(umod,@annihilation);