USCbiostats / slurmR

slurmR: A Lightweight Wrapper for Slurm
https://uscbiostats.github.io/slurmR/
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When submitting a job with sbatch(..., array = ) Slurm_collect fails #25

Closed gvegayon closed 4 years ago

gvegayon commented 4 years ago

Slurm_collect needs to be able to collect whatever is available. And also, I need to work on a better way to put everything together. Right now it seems that it is not submitting the job to the same folder. Slurm_collect is trying to get x$opts_job$tmp_path but this is not reflecting on the job object.