search

USEPA / AMET

Code base for the U.S. EPA’s Atmospheric Model Evaluation Tool (AMET)
https://www.epa.gov/CMAQ/atmospheric-model-evaluation-tool
21 stars 21 forks source link

Update several R scripts, the AQ .input files, and the added $AMETBASE to all the run scripts #146

Closed wkappel closed 2 years ago

wkappel commented 2 years ago

Modified all the run scripts to include AMETBASE environment variable and change v14 to v15 where necessary. Updated all_scripts.input and AMET_batch.input to include additional Kellyplot variables and fix the definition of avg_func. Fixed minor issues in the AQ_Bugleplot.R, AQ_Plot_Spatial_Ratio.R, and AQ_Stacked_Barplot_AE6.R scripts.

    modified:   ../../R_analysis_code/AQ_Bugleplot.R
modified:   ../../R_analysis_code/AQ_Plot_Spatial_Ratio.R
modified:   ../../R_analysis_code/AQ_Stacked_Barplot_AE6.R
modified:   input_files/AMET_batch.input
modified:   input_files/all_scripts.input
modified:   run_AMET_batch_scripts.csh
modified:   run_boxplot.csh
modified:   run_boxplot_DofW.csh
modified:   run_boxplot_ggplot.csh
modified:   run_boxplot_hourly.csh
modified:   run_boxplot_plotly.csh
modified:   run_boxplot_roselle.csh
modified:   run_bugleplot.csh
modified:   run_histogram.csh
modified:   run_kellyplot.csh
modified:   run_kellyplot_multisim.csh
modified:   run_kellyplot_region.csh
modified:   run_kellyplot_season.csh
modified:   run_monthly_stat_plot.csh
modified:   run_plot_spatial.csh
modified:   run_plot_spatial_diff.csh
modified:   run_plot_spatial_diff_leaflet.csh
modified:   run_plot_spatial_leaflet.csh
modified:   run_plot_spatial_mtom.csh
modified:   run_plot_spatial_mtom_leaflet.csh
modified:   run_plot_spatial_mtom_species.csh
modified:   run_plot_spatial_ratio.csh
modified:   run_raw_data.csh
modified:   run_scatterplot.csh
modified:   run_scatterplot_bins.csh
modified:   run_scatterplot_bins_plotly.csh
modified:   run_scatterplot_density.csh
modified:   run_scatterplot_density_ggplot.csh
modified:   run_scatterplot_ggplot.csh
modified:   run_scatterplot_mtom.csh
modified:   run_scatterplot_mtom_density.csh
modified:   run_scatterplot_multi.csh
modified:   run_scatterplot_multi_plotly.csh
modified:   run_scatterplot_percentiles.csh
modified:   run_scatterplot_plotly.csh
modified:   run_scatterplot_single.csh
modified:   run_scatterplot_skill.csh
modified:   run_scatterplot_soil.csh
modified:   run_soccerplot.csh
modified:   run_spectral_analysis.csh
modified:   run_stacked_barplot.csh
modified:   run_stacked_barplot_AE6.csh
modified:   run_stacked_barplot_AE6_ggplot.csh
modified:   run_stacked_barplot_AE6_plotly.csh
modified:   run_stacked_barplot_AE6_ts.csh
modified:   run_stacked_barplot_panel.csh
modified:   run_stacked_barplot_panel_AE6.csh
modified:   run_stacked_barplot_panel_AE6_multi.csh
modified:   run_stacked_barplot_soil.csh
modified:   run_stacked_barplot_soil_multi.csh
modified:   run_stats.csh
modified:   run_stats_plots.csh
modified:   run_stats_plots_leaflet.csh
modified:   run_temporal.csh
modified:   run_timeseries.csh
modified:   run_timeseries_dygraph.csh
modified:   run_timeseries_mtom.csh
modified:   run_timeseries_multi.csh
modified:   run_timeseries_multi_plotly.csh
modified:   run_timeseries_multi_species.csh
modified:   run_timeseries_plotly.csh
modified:   run_timeseries_species_plotly.csh