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UT-CHG / BET

Python package for data-consistent stochastic inverse and forward problems.
http://ut-chg.github.io/BET
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FEniCS examples fail #323

Closed mathematicalmichael closed 5 years ago

mathematicalmichael commented 5 years ago

inconsistent use of tabs/spaces. Seems like my auto-linting did not actually go deep enough in its recursion of folders. Completely missed these files. I believe that a pass through autopep should be able to fix this.

Minimal steps to reproduce issue (fresh env):

git clone https://github.com/UT-CHG/BET.git
cd BET/
python setup.py install
python examples/FEniCS/projectKL.py

Came across it by accident as I was getting bored of running the same examples and realized I had never played around with this folder at all. @eecsu

I'll go ahead and submit a PR just for this folder.

mathematicalmichael commented 5 years ago

confirmed: linting did address this bug.

However, still unable to run BET_script.py

here's a quick debugging tip: open the binder, open the python files, right click "create console for editor" , select all code in the python file, hit ctrl+enter. The console is dedicated to this file alone.

mathematicalmichael commented 5 years ago

furthermore, and this may be related to the error in BET_script.py: when trying to run myModel_serial.py, I get FileNotFound for the KL_expansion.mat file. I assume that's because there was an error in it's creation in the aforementioned script file.

eecsu commented 5 years ago

https://github.com/UT-CHG/BET/pull/324 addresses this