UT-Covid / episimlab

Framework for development of epidemiological models
https://ut-covid.github.io/episimlab/
BSD 3-Clause "New" or "Revised" License
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New SEIR process with FOI included #33

Closed ethho closed 3 years ago

ethho commented 3 years ago

Addition of vaccination compartment depends on two separate FOIs with different beta values for vaccinated and unvaccinated individuals. The easiest way to implement this as of now is to call the Cython function _brute_force_FOI twice within a new Cython function similar to _brute_force_SEIR.

Work Plan

Work on this issue will be test driven.

ethho commented 3 years ago

Instead of including model as parameter in TestCompareBasicModels, I wrote a new pytest test_consistent_with_foi_separate.