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UTHealth-CCB / clamp-support

Clinical Language Annotation Modeling and Processing toolkit
http://clamp.uth.edu/
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Entity annotation issue: unable to select an entity when there is a sub-type added to the said entity #30

Open gxiong100 opened 5 years ago

gxiong100 commented 5 years ago

As stated in the title, the issue is that I am unable to select an entity when there is a sub-type added to the said entity.

For example: Entities include gene_name, bodyloc, and problem, and then I add the sub-type diagnosis to problem. When I go to manually annotate a .txt file, I can only select diagnosis and not problem. Furthermore, in the basic CLAMP tutorial, there is another 'problem' entity so if a person wanted to select 'problem' and not 'diagnosis' he or she could, but for reasons unknown to me I don't have a separate 'problem' entity showing.

Screen Shot 2019-07-03 at 9 34 39 AM
jingqihit commented 5 years ago

Hi, We updated the strategy here so that we can remove duplicated 'problem' from the menu. If you'd like to annotate both 'problem' and 'diagnosis' in the same document, you can create a sub-type 'problem' under 'problem'.

Thanks, Jingqi