add keep unparsed fields option

UW-GAC / wgsaparsr

Code for parsing TOPMED variant annotation files produced by the WGSA annotation tool.

Other

5 stars 3 forks source link

Open bheavner opened 6 years ago

bheavner commented 6 years ago

potentially useful for troubleshooting (perhaps with the troubleshooting functions?)

bheavner commented 6 years ago

the select() looks like it happens in .write_to_file()

bheavner commented 6 years ago

I think this is the dafault behavior of .pivot_then_parse() and .parse_then_pivot() which include calls to .preserve_raw().

So, to check - ensure that .pivot_then_parse() can work on a test config file on the output from get_problem_chunk()