Errors if 0 or 1 fields in config file with SNV = TRUE

UW-GAC / wgsaparsr

Code for parsing TOPMED variant annotation files produced by the WGSA annotation tool.

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Errors if 0 or 1 fields in config file with SNV = TRUE #97

Open bheavner opened 5 years ago

bheavner commented 5 years ago

Seems to require at least 2 SNV = TRUE fields (maybe true for INDEL and dbnsfp too)

bheavner commented 5 years ago

Note: one error encountered is that after line 106 in parse_to_file, parsed_lines <- .parse_then_pivot(all_fields, config, type) parsed_lines doesn't have the field name any more