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UWB-Biocomputing / GraphSystemsAnalysis

Analysis code for understanding the activities of graph-structured systems, such as development in cultures of dissociated cortical cultures.
https://uwb-biocomputing.github.io/GraphSystemsAnalysis/
Apache License 2.0
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Rewrite getBinnedBurstSpikes in C++ #20

Open stiber opened 1 year ago

stiber commented 1 year ago

Currently, it is in Matlab and takes 2-4 days to run for a full neuronal development simulation. This could certainly be sped up in C++. The main algorithms aren't complicated, but will require reading data from an HDF5 file in C++.