I had a comet job run out of memory, and it took me a while to remember/figure out to set the spectrum_batch_size. I think it would be good if, when the spectrum_batch_size is 0, you print a message to stderr that says something like this:
Reading all spectra into memory.
If your search terminates at this point, please set the spectrum_batch_size parameter.
Without this message, I was just seeing the job stop with no explanation.
jke000
commented
2 years ago
I had a comet job run out of memory, and it took me a while to remember/figure out to set the
spectrum_batch_size. I think it would be good if, when thespectrum_batch_sizeis 0, you print a message to stderr that says something like this:Without this message, I was just seeing the job stop with no explanation.