UWPR / Comet

An tandem mass spectrometry (MS/MS) sequence database search tool.
https://uwpr.github.io/Comet/
Apache License 2.0
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Comet 2024.01 crashes #63

Closed cbielow closed 4 months ago

cbielow commented 4 months ago

another test case in OpenMS crashes with

 Comet version "2024.01 rev. 0"

 Search start:  07/04/2024, 10:58:53 AM
 - Input file: C:/dev/openms/src/tests/topp/THIRDPARTY/spectra_comet.mzML
   - Load spectra: 3
     - Search progress:
 Error in StorePeptides.  stored twice:  1 0.000000, 0 0.000000

The error is here: CometSearch.cpp#L4027, and it seems this should not have happened :/

Previous Comet versions run fine.

I will attach the param.txt here. The mzML can be downloaded here, the FASTA here

(probably unrelated to #62)

jke000 commented 4 months ago

I have the fix for this also which will be committed soon. Thanks for reporting this one also.

jke000 commented 4 months ago

This is addressed by commit e5cf236.