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Unidata / MetPy

MetPy is a collection of tools in Python for reading, visualizing and performing calculations with weather data.
https://unidata.github.io/MetPy/
BSD 3-Clause "New" or "Revised" License
1.25k stars 414 forks source link

Nightly build is failing #3068

Closed github-actions[bot] closed 11 months ago

github-actions[bot] commented 1 year ago

The Nightly workflow is failing. The documentation build failed. Log:

python override_check.py
Override check successful.
Running Sphinx v7.2.6
making output directory... done
Using Sphinx-Gallery to convert rst text blocks to markdown for .ipynb files.
[autosummary] generating autosummary for: api/index.rst, api/references.rst, devel/CONTRIBUTING.md, devel/index.rst, devel/infrastructureguide.rst, devel/roadmap.rst, index.rst, userguide/SUPPORT.md, userguide/apichange.rst, userguide/citing.rst, userguide/gempak.rst, userguide/index.rst, userguide/installguide.rst, userguide/media.rst, userguide/startingguide.rst, userguide/upgradeguide.rst
[autosummary] generating autosummary for: /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.calc.rst, /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.constants.rst, /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.interpolate.rst, /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.io.rst, /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.plots.ctables.rst, /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.plots.rst, /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.units.rst, /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.xarray.rst
[autosummary] generating autosummary for: /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.calc.absolute_momentum.rst, /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.calc.absolute_vorticity.rst, /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.calc.add_height_to_pressure.rst, /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.calc.add_pressure_to_height.rst, /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.calc.advection.rst, /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.calc.ageostrophic_wind.rst, /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.calc.altimeter_to_sea_level_pressure.rst, /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.calc.altimeter_to_station_pressure.rst, /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.calc.angle_to_direction.rst, /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.calc.apparent_temperature.rst, ..., /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.plots.read_colortable.rst, /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.plots.wx_code_to_numeric.rst, /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.units.check_units.rst, /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.units.concatenate.rst, /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.units.is_quantity.rst, /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.units.masked_array.rst, /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.units.pandas_dataframe_to_unit_arrays.rst, /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.units.process_units.rst, /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.units.setup_registry.rst, /home/runner/work/MetPy/MetPy/docs/api/generated/metpy.xarray.grid_deltas_from_dataarray.rst
loading intersphinx inventory from https://scitools.org.uk/cartopy/docs/latest/objects.inv...
loading intersphinx inventory from https://matplotlib.org/stable/objects.inv...
loading intersphinx inventory from https://numpy.org/doc/stable/objects.inv...
loading intersphinx inventory from https://pandas.pydata.org/docs/objects.inv...
loading intersphinx inventory from https://pint.readthedocs.io/en/stable/objects.inv...
loading intersphinx inventory from https://pyproj4.github.io/pyproj/stable/objects.inv...
loading intersphinx inventory from https://docs.python.org/3/objects.inv...
loading intersphinx inventory from https://docs.scipy.org/doc/scipy/objects.inv...
loading intersphinx inventory from https://docs.xarray.dev/en/stable/objects.inv...
generating gallery...
generating gallery for examples... [ 12%] XArray_Projections.py
/opt/hostedtoolcache/Python/3.11.6/x64/lib/python3.11/site-packages/cartopy/io/__init__.py:241: DownloadWarning: Downloading: https://naturalearth.s3.amazonaws.com/10m_physical/ne_10m_coastline.zip
  warnings.warn(f'Downloading: {url}', DownloadWarning)
/opt/hostedtoolcache/Python/3.11.6/x64/lib/python3.11/site-packages/cartopy/io/__init__.py:241: DownloadWarning: Downloading: https://naturalearth.s3.amazonaws.com/10m_physical/ne_10m_lakes.zip
  warnings.warn(f'Downloading: {url}', DownloadWarning)
/opt/hostedtoolcache/Python/3.11.6/x64/lib/python3.11/site-packages/cartopy/io/__init__.py:241: DownloadWarning: Downloading: https://naturalearth.s3.amazonaws.com/10m_physical/ne_10m_rivers_lake_centerlines.zip
  warnings.warn(f'Downloading: {url}', DownloadWarning)
generating gallery for examples... [ 25%] sigma_to_pressure_interpolation.py
/opt/hostedtoolcache/Python/3.11.6/x64/lib/python3.11/site-packages/cartopy/io/__init__.py:241: DownloadWarning: Downloading: https://naturalearth.s3.amazonaws.com/50m_physical/ne_50m_coastline.zip
  warnings.warn(f'Downloading: {url}', DownloadWarning)
/opt/hostedtoolcache/Python/3.11.6/x64/lib/python3.11/site-packages/cartopy/io/__init__.py:241: DownloadWarning: Downloading: https://naturalearth.s3.amazonaws.com/10m_cultural/ne_10m_admin_1_states_provinces_lakes.zip
  warnings.warn(f'Downloading: {url}', DownloadWarning)
generating gallery for examples... [ 38%] Advanced_Sounding.py
generating gallery for examples... [ 50%] cross_section.py
/opt/hostedtoolcache/Python/3.11.6/x64/lib/python3.11/site-packages/cartopy/io/__init__.py:241: DownloadWarning: Downloading: https://naturalearth.s3.amazonaws.com/50m_cultural/ne_50m_admin_1_states_provinces_lakes.zip
  warnings.warn(f'Downloading: {url}', DownloadWarning)
generating gallery for examples... [ 62%] Four_Panel_Map.py
/opt/hostedtoolcache/Python/3.11.6/x64/lib/python3.11/site-packages/cartopy/io/__init__.py:241: DownloadWarning: Downloading: https://naturalearth.s3.amazonaws.com/50m_cultural/ne_50m_admin_0_boundary_lines_land.zip
  warnings.warn(f'Downloading: {url}', DownloadWarning)
generating gallery for examples... [ 75%] isentropic_example.py
generating gallery for examples... [ 88%] meteogram_metpy.py
generating gallery for examples... [100%] Advanced_Sounding_With_Complex_Layout.py
generating gallery for examples/calculations... [  5%] Parse_Angles.py
generating gallery for examples/calculations... [ 10%] Dewpoint_and_Mixing_Ratio.py
generating gallery for examples/calculations... [ 14%] Angle_to_Direction.py
generating gallery for examples/calculations... [ 19%] Wind_Speed.py
generating gallery for examples/calculations... [ 24%] Divergence.py
generating gallery for examples/calculations... [ 29%] Vorticity.py
generating gallery for examples/calculations... [ 33%] Absolute_Vorticity.py
generating gallery for examples/calculations... [ 38%] Total_Deformation.py
generating gallery for examples/calculations... [ 43%] Shearing_Deformation.py
generating gallery for examples/calculations... [ 48%] Stretching_Deformation.py
generating gallery for examples/calculations... [ 52%] Static_Stability.py
generating gallery for examples/calculations... [ 57%] Mean_Pressure_Weighted.py
generating gallery for examples/calculations... [ 62%] Mountain_Problem.py
generating gallery for examples/calculations... [ 67%] Bulk_Shear.py
generating gallery for examples/calculations... [ 71%] Thickness_Hydrostatic.py
generating gallery for examples/calculations... [ 76%] Equivalent_Potential_Temperature.py
generating gallery for examples/calculations... [ 81%] Advection.py
generating gallery for examples/calculations... [ 86%] Gradient.py
generating gallery for examples/calculations... [ 90%] QVector.py
generating gallery for examples/calculations... [ 95%] Smoothing.py
generating gallery for examples/calculations... [100%] Sounding_Calculations.py
generating gallery for examples/formats... [ 33%] GINI_Water_Vapor.py
generating gallery for examples/formats... [ 67%] NEXRAD_Level_3_File.py
generating gallery for examples/formats... [100%] NEXRAD_Level_2_File.py
generating gallery for examples/gridding... [ 20%] Find_Natural_Neighbors_Verification.py
generating gallery for examples/gridding... [ 40%] Wind_SLP_Interpolation.py
/opt/hostedtoolcache/Python/3.11.6/x64/lib/python3.11/site-packages/cartopy/io/__init__.py:241: DownloadWarning: Downloading: https://naturalearth.s3.amazonaws.com/50m_physical/ne_50m_ocean.zip
  warnings.warn(f'Downloading: {url}', DownloadWarning)
generating gallery for examples/gridding... [ 60%] Point_Interpolation.py
generating gallery for examples/gridding... [ 80%] Inverse_Distance_Verification.py
generating gallery for examples/gridding... [100%] Natural_Neighbor_Verification.py
generating gallery for examples/plots... [  6%] Simplified_Image_Plot.py
generating gallery for examples/plots... [ 12%] US_Counties.py
generating gallery for examples/plots... [ 18%] raster_declarative.py
generating gallery for examples/plots... [ 24%] Simple_Fronts_Plot.py
generating gallery for examples/plots... [ 29%] spc_convective_outlook.py
generating gallery for examples/plots... [ 35%] Combined_plotting.py
generating gallery for examples/plots... [ 41%] surface_declarative.py
generating gallery for examples/plots... [ 47%] upperair_declarative.py
generating gallery for examples/plots... [ 53%] nhc_wind_probabilities.py
generating gallery for examples/plots... [ 59%] Skew-T_Layout.py
generating gallery for examples/plots... [ 65%] Hodograph_Inset.py
generating gallery for examples/plots... [ 71%] Sounding_LCL_Dataset.py
generating gallery for examples/plots... [ 76%] Plotting_Surface_Analysis.py
/opt/hostedtoolcache/Python/3.11.6/x64/lib/python3.11/site-packages/cartopy/io/__init__.py:241: DownloadWarning: Downloading: https://naturalearth.s3.amazonaws.com/110m_physical/ne_110m_lakes.zip
  warnings.warn(f'Downloading: {url}', DownloadWarning)
generating gallery for examples/plots... [ 82%] Simple_Sounding.py
generating gallery for examples/plots... [ 88%] Mesonet_Stationplot.py
/opt/hostedtoolcache/Python/3.11.6/x64/lib/python3.11/site-packages/cartopy/io/__init__.py:241: DownloadWarning: Downloading: https://naturalearth.s3.amazonaws.com/10m_physical/ne_10m_land.zip
  warnings.warn(f'Downloading: {url}', DownloadWarning)
generating gallery for examples/plots... [ 94%] Station_Plot.py
generating gallery for examples/plots... [100%] Station_Plot_with_Layout.py
generating gallery for tutorials... [ 20%] unit_tutorial.py
generating gallery for tutorials... [ 40%] area_tutorial.py
generating gallery for tutorials... [ 60%] upperair_soundings.py
generating gallery for tutorials... [ 80%] xarray_tutorial.py
generating gallery for tutorials... [100%] declarative_tutorial.py
computation time summary:
    - ../examples/plots/Mesonet_Stationplot.py:                       27.33 sec   0.0 MB
    - ../examples/plots/Station_Plot.py:                              24.37 sec   0.0 MB
    - ../examples/plots/nhc_wind_probabilities.py:                    23.40 sec   0.0 MB
    - ../examples/gridding/Wind_SLP_Interpolation.py:                 22.68 sec   0.0 MB
    - ../examples/XArray_Projections.py:                              21.90 sec   0.0 MB
    - ../examples/isentropic_example.py:                              20.37 sec   0.0 MB
    - ../tutorials/declarative_tutorial.py:                           19.51 sec   0.0 MB
    - ../tutorials/area_tutorial.py:                                  18.99 sec   0.0 MB
    - ../examples/Four_Panel_Map.py:                                  18.53 sec   0.0 MB
    - ../examples/sigma_to_pressure_interpolation.py:                 16.56 sec   0.0 MB
    - ../examples/plots/spc_convective_outlook.py:                    16.31 sec   0.0 MB
    - ../examples/plots/Combined_plotting.py:                         14.61 sec   0.0 MB
    - ../examples/plots/Plotting_Surface_Analysis.py:                 14.01 sec   0.0 MB
    - ../examples/formats/NEXRAD_Level_2_File.py:                      9.44 sec   0.0 MB
    - ../examples/gridding/Point_Interpolation.py:                     9.30 sec   0.0 MB
    - ../examples/cross_section.py:                                    8.97 sec   0.0 MB
    - ../examples/plots/US_Counties.py:                                4.35 sec   0.0 MB
    - ../tutorials/xarray_tutorial.py:                                 4.24 sec   0.0 MB
    - ../examples/formats/NEXRAD_Level_3_File.py:                      3.22 sec   0.0 MB
    - ../examples/plots/surface_declarative.py:                        3.03 sec   0.0 MB
    - ../examples/plots/Station_Plot_with_Layout.py:                   2.19 sec   0.0 MB
    - ../tutorials/upperair_soundings.py:                              1.74 sec   0.0 MB
    - ../examples/plots/raster_declarative.py:                         1.67 sec   0.0 MB
    - ../examples/formats/GINI_Water_Vapor.py:                         1.63 sec   0.0 MB
    - ../examples/plots/Simplified_Image_Plot.py:                      1.37 sec   0.0 MB
    - ../examples/plots/upperair_declarative.py:                       1.36 sec   0.0 MB
    - ../examples/Advanced_Sounding_With_Complex_Layout.py:            1.14 sec   0.0 MB
    - ../examples/meteogram_metpy.py:                                  0.88 sec   0.0 MB
    - ../examples/calculations/Smoothing.py:                           0.77 sec   0.0 MB
    - ../examples/gridding/Natural_Neighbor_Verification.py:           0.65 sec   0.0 MB
    - ../examples/gridding/Inverse_Distance_Verification.py:           0.53 sec   0.0 MB
    - ../examples/plots/Simple_Sounding.py:                            0.53 sec   0.0 MB
    - ../examples/gridding/Find_Natural_Neighbors_Verification.py:     0.51 sec   0.0 MB
    - ../examples/calculations/Sounding_Calculations.py:               0.45 sec   0.0 MB
    - ../examples/plots/Skew-T_Layout.py:                              0.39 sec   0.0 MB
    - ../examples/plots/Hodograph_Inset.py:                            0.37 sec   0.0 MB
    - ../examples/Advanced_Sounding.py:                                0.31 sec   0.0 MB
    - ../examples/plots/Sounding_LCL_Dataset.py:                       0.31 sec   0.0 MB
    - ../examples/calculations/QVector.py:                             0.29 sec   0.0 MB
    - ../examples/calculations/Total_Deformation.py:                   0.24 sec   0.0 MB
    - ../examples/calculations/Absolute_Vorticity.py:                  0.24 sec   0.0 MB
    - ../examples/calculations/Vorticity.py:                           0.23 sec   0.0 MB
    - ../examples/calculations/Shearing_Deformation.py:                0.23 sec   0.0 MB
    - ../examples/calculations/Stretching_Deformation.py:              0.23 sec   0.0 MB
    - ../examples/calculations/Divergence.py:                          0.21 sec   0.0 MB
    - ../examples/calculations/Advection.py:                           0.21 sec   0.0 MB
    - ../examples/calculations/Wind_Speed.py:                          0.18 sec   0.0 MB
    - ../examples/plots/Simple_Fronts_Plot.py:                         0.17 sec   0.0 MB
    - ../examples/calculations/Equivalent_Potential_Temperature.py:    0.11 sec   0.0 MB
    - ../examples/calculations/Gradient.py:                            0.02 sec   0.0 MB
    - ../tutorials/unit_tutorial.py:                                   0.02 sec   0.0 MB
    - ../examples/calculations/Thickness_Hydrostatic.py:               0.02 sec   0.0 MB
    - ../examples/calculations/Bulk_Shear.py:                          0.02 sec   0.0 MB
    - ../examples/calculations/Mean_Pressure_Weighted.py:              0.02 sec   0.0 MB
    - ../examples/calculations/Static_Stability.py:                    0.01 sec   0.0 MB
    - ../examples/calculations/Mountain_Problem.py:                    0.01 sec   0.0 MB
    - ../examples/calculations/Dewpoint_and_Mixing_Ratio.py:           0.01 sec   0.0 MB
    - ../examples/calculations/Angle_to_Direction.py:                  0.01 sec   0.0 MB
    - ../examples/calculations/Parse_Angles.py:                        0.00 sec   0.0 MB
myst v2.0.0: MdParserConfig(commonmark_only=False, gfm_only=False, enable_extensions=set(), disable_syntax=[], all_links_external=False, url_schemes=('http', 'https', 'mailto', 'ftp'), ref_domains=None, fence_as_directive=set(), number_code_blocks=[], title_to_header=False, heading_anchors=2, heading_slug_func=None, html_meta={}, footnote_transition=True, words_per_minute=200, substitutions={}, linkify_fuzzy_links=True, dmath_allow_labels=True, dmath_allow_space=True, dmath_allow_digits=True, dmath_double_inline=False, update_mathjax=True, mathjax_classes='tex2jax_process|mathjax_process|math|output_area', enable_checkboxes=False, suppress_warnings=[], highlight_code_blocks=True)
Generating areas file...
building [mo]: targets for 0 po files that are out of date
writing output... 
building [html]: targets for 16 source files that are out of date
updating environment: [new config] 311 added, 0 changed, 0 removed
reading sources... [  0%] api/areas
reading sources... [  1%] api/generated/metpy.calc
reading sources... [  1%] api/generated/metpy.calc.absolute_momentum
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reading sources... [  2%] api/generated/metpy.calc.add_height_to_pressure
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reading sources... [  3%] api/generated/metpy.calc.ageostrophic_wind
reading sources... [  3%] api/generated/metpy.calc.altimeter_to_sea_level_pressure
reading sources... [  3%] api/generated/metpy.calc.altimeter_to_station_pressure
reading sources... [  4%] api/generated/metpy.calc.angle_to_direction
reading sources... [  4%] api/generated/metpy.calc.apparent_temperature
reading sources... [  4%] api/generated/metpy.calc.azimuth_range_to_lat_lon
reading sources... [  5%] api/generated/metpy.calc.brunt_vaisala_frequency
reading sources... [  5%] api/generated/metpy.calc.brunt_vaisala_frequency_squared
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reading sources... [ 16%] api/generated/metpy.calc.heat_index
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reading sources... [ 16%] api/generated/metpy.calc.height_to_pressure_std
reading sources... [ 17%] api/generated/metpy.calc.inertial_advective_wind
reading sources... [ 17%] api/generated/metpy.calc.isentropic_interpolation
reading sources... [ 17%] api/generated/metpy.calc.isentropic_interpolation_as_dataset
reading sources... [ 18%] api/generated/metpy.calc.k_index
reading sources... [

Linkchecker output:

Checking all links
devel/CONTRIBUTING.md:336: https://beta.ruff.rs/docs/ -> redirected https://docs.astral.sh/ruff/
api/references.rst:207: https://library.wmo.int/doc_num.php?explnum_id=7997 -> broken HTTPSConnectionPool(host='library.wmo.int', port=443): Max retries exceeded with url: /doc_num.php?explnum_id=7997 (Caused by SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: unable to get local issuer certificate (_ssl.c:1006)')))
api/references.rst:203: https://library.wmo.int/index.php?lvl=notice_display&id=13617 -> broken HTTPSConnectionPool(host='library.wmo.int', port=443): Max retries exceeded with url: /index.php?lvl=notice_display&id=13617 (Caused by SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: unable to get local issuer certificate (_ssl.c:1006)')))
api/references.rst:199: https://library.wmo.int/index.php?lvl=notice_display&id=12407 -> broken HTTPSConnectionPool(host='library.wmo.int', port=443): Max retries exceeded with url: /index.php?lvl=notice_display&id=12407 (Caused by SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: unable to get local issuer certificate (_ssl.c:1006)')))
dopplershift commented 1 year ago

Looks like moist_lapse is angering the ODE integration gods once again. Scipy 1.11.0rc1.

dopplershift commented 1 year ago

We're now failing in this issue with matplotlib 3.8rc1 (and maybe cartopy 0.22).

dopplershift commented 11 months ago

Currently failing due to WMO links, which should be fixed by #3223.