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UofS-Pulse-Binfo / vcf_filter

Form interface so users can custom filter existing VCF files and export in a variety of formats.
GNU General Public License v2.0
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'Request-URI Too Long' Error #56

Closed chunhuaicheng closed 4 years ago

chunhuaicheng commented 4 years ago

We have a VCF file that is about 200MB in size and it has a huge list of germplasm in the header. After submitting the job, the website breaks with a 'Request-URI Too Long' Error. It turned out the whole germplasm list was pasting into the URL. Is there a workaround? Below is the URL from the browser after clicking the 'Filter' button:

https://www.rosaceae.org/filter_vcf/Genotype-Matrix?restrict_dataset%5Bregions%5D=&restrict_dataset%5Bgermplasm_available%5D=P01-A01-CA-1%09P01-A02-CA-2%09P01-A03-CA-3%09P01-A04-CA-4%09P01-A05-CA-5%09P01-A06-CA-6%09P01-A07-CA-7%09P01-A08-CA-8%09P01-A09-CA-9%09P01-A10-CA-10%09P01-A11-CA-11%09P01-A12-CA-12%09P01-B01-CA-13%09P01-B02-CA-14%09P01-B03-CA-15%09P01-B04-CA-16%09P01-B05-CA-17%09P01-B06-CA-18%09P01-B07-CA-19%09P01-B08-CA-20%09P01-B09-CA-21%09P01-B10-CA-22%09P01-B11-CA-23%09P01-B12-CA-24%09P01-C01-CA-25%09P01-C02-CA-26%09P01-C03-CA-27%09P01-C04-CA-28%09P01-C05-CA-29%09P01-C06-CA-30%09P01-C07-CA-31%09P01-C08-CA-32%09P01-C09-CA-33%09P01-C10-CA-34%09P01-C11-CA-35%09P01-C12-CA-36%09P01-D01-CA-37%09P01-D02-CA-38%09P01-D03-CA-39%09P01-D04-CA-40%09P01-D05-CA-41%09P01-D06-CA-42%09P01-D07-CA-43%09P01-D08-CA-44%09P01-D09-CA-45%09P01-D10-CA-46%09P01-D11-CA-47%09P01-D12-CA-48%09P01-E01-CA-49%09P01-E02-CA-50%09P01-E03-CA-51%09P01-E04-CA-52%09P01-E05-CA-53%09P01-E06-CA-54%09P01-E07-CA-55%09P01-E08-CA-56%09P01-E09-CA-57%09P01-E10-CA-58%09P01-E11-CA-59%09P01-E12-CA-60%09P01-F01-CA-61%09P01-F02-CA-62%09P01-F03-CA-63%09P01-F04-CA-64%09P01-F05-CA-65%09P01-F06-CA-66%09P01-F07-CA-67%09P01-F08-CA-68%09P01-F09-CA-69%09P01-F10-CA-70%09P01-F11-CA-71%09P01-F12-CA-72%09P01-G01-CA-73%09P01-G02-CA-74%09P01-G03-CA-75%09P01-G04-CA-76%09P01-G05-CA-77%09P01-G06-CA-78%09P01-G07-CA-79%09P01-G08-CA-80%09P01-G09-CA-81%09P01-G10-CA-82%09P01-G11-CA-83%09P01-G12-CA-84%09P01-H01-CA-85%09P01-H02-CA-86%09P01-H03-CA-87%09P01-H04-CA-88%09P01-H05-CA-89%09P01-H06-CA-90%09P01-H07-CA-91%09P01-H08-CA-92%09P01-H09-CA-93%09P01-H10-CA-94%09P01-H11-CA-95%09P01-H12-CA-96%09P02-A01-CA-289%09P02-A02-CA-297%09P02-A03-CA-305%09P02-A04-CA-313%09P02-A05-CA-321%09P02-A06-CA-329%09P02-A07-CA-337%09P02-A08-CA-345%09P02-A09-CA-257%09P02-A10-CA-265%09P02-A11-CA-273%09P02-A12-CA-281%09P02-B01-CA-290%09P02-B02-CA-298%09P02-B03-CA-306%09P02-B04-CA-314%09P02-B05-CA-322%09P02-B06-CA-330%09P02-B07-CA-338%09P02-B08-CA-356%09P02-B09-CA-258%09P02-B10-CA-266%09P02-B11-CA-274%09P02-B12-CA-282%09P02-C01-CA-291%09P02-C02-CA-299%09P02-C03-CA-307%09P02-C04-CA-315%09P02-C05-CA-323%09P02-C06-CA-331%09P02-C07-CA-339%09P02-C08-CA-347%09P02-C09-CA-259%09P02-C10-CA-267%09P02-C11-CA-275%09P02-C12-CA-283%09P02-D01-CA-292%09P02-D02-CA-300%09P02-D03-CA-308%09P02-D04-CA-316%09P02-D05-CA-324%09P02-D06-CA-332%09P02-D07-CA-340%09P02-D08-CA-348%09P02-D09-CA-260%09P02-D10-CA-268%09P02-D11-CA-276%09P02-D12-CA-284%09P02-E01-CA-293%09P02-E02-CA-301%09P02-E03-CA-309%09P02-E04-CA-317%09P02-E05-CA-325%09P02-E06-CA-333%09P02-E07-CA-341%09P02-E08-CA-349%09P02-E09-CA-261%09P02-E10-CA-269%09P02-E11-CA-277%09P02-E12-CA-285%09P02-F01-CA-294%09P02-F02-CA-302%09P02-F03-CA-310%09P02-F04-CA-318%09P02-F05-CA-326%09P02-F06-CA-334%09P02-F07-CA-342%09P02-F08-CA-350%09P02-F09-CA-262%09P02-F10-CA-270%09P02-F11-CA-278%09P02-F12-CA-286%09P02-G01-CA-295%09P02-G02-CA-303%09P02-G03-CA-311%09P02-G04-CA-319%09P02-G05-CA-327%09P02-G06-CA-335%09P02-G07-CA-343%09P02-G08-CA-255%09P02-G09-CA-263%09P02-G10-CA-271%09P02-G11-CA-279%09P02-G12-CA-287%09P02-H01-CA-296%09P02-H02-CA-304%09P02-H03-CA-312%09P02-H04-CA-320%09P02-H05-CA-328%09P02-H06-CA-336%09P02-H07-CA-344%09P02-H08-CA-256%09P02-H09-CA-264%09P02-H10-CA-272%09P02-H11-CA-280%09P02-H12-CA-288%09P03-A01-CA-97%09P03-A02-CA-105%09P03-A03-CA-113%09P03-A04-CA-121%09P03-A05-CA-129%09P03-A06-CA-137%09P03-A07-CA-145%09P03-A08-CA-153%09P03-A09-CA-161%09P03-A10-CA-169%09P03-A11-CA-177%09P03-A12-CA-185%09P03-B01-CA-98%09P03-B02-CA-106%09P03-B03-CA-114%09P03-B04-CA-122%09P03-B05-CA-130%09P03-B06-CA-138%09P03-B07-CA-146%09P03-B08-CA-154%09P03-B09-CA-162%09P03-B10-CA-170%09P03-B11-CA-178%09P03-B12-CA-186%09P03-C01-CA-99%09P03-C02-CA-107%09P03-C03-CA-116%09P03-C04-CA-123%09P03-C05-CA-131%09P03-C06-CA-139%09P03-C07-CA-147%09P03-C08-CA-155%09P03-C09-CA-163%09P03-C10-CA-171%09P03-C11-CA-179%09P03-C12-CA-187%09P03-D01-CA-100%09P03-D02-CA-108%09P03-D03-CA-115%09P03-D04-CA-124%09P03-D05-CA-132%09P03-D06-CA-140%09P03-D07-CA-148%09P03-D08-CA-156%09P03-D09-CA-164%09P03-D10-CA-172%09P03-D11-CA-180%09P03-D12-CA-188%09P03-E01-CA-101%09P03-E02-CA-109%09P03-E03-CA-117%09P03-E04-CA-125%09P03-E05-CA-133%09P03-E06-CA-141%09P03-E07-CA-149%09P03-E08-CA-157%09P03-E09-CA-165%09P03-E10-CA-173%09P03-E11-CA-181%09P03-E12-CA-189%09P03-F01-CA-102%09P03-F02-CA-110%09P03-F03-CA-118%09P03-F04-CA-126%09P03-F05-CA-134%09P03-F06-CA-142%09P03-F07-CA-150%09P03-F08-CA-158%09P03-F09-CA-166%09P03-F10-CA-174%09P03-F11-CA-182%09P03-F12-CA-190%09P03-G01-CA-103%09P03-G02-CA-111%09P03-G03-CA-119%09P03-G04-CA-127%09P03-G05-CA-135%09P03-G06-CA-143%09P03-G07-CA-151%09P03-G08-CA-159%09P03-G09-CA-167%09P03-G10-CA-175%09P03-G11-CA-183%09P03-G12-CA-191%09P03-H01-CA-104%09P03-H02-CA-112%09P03-H03-CA-120%09P03-H04-CA-128%09P03-H05-CA-136%09P03-H06-CA-144%09P03-H07-CA-152%09P03-H08-CA-160%09P03-H09-CA-168%09P03-H10-CA-176%09P03-H11-CA-184%09P03-H12-CA-192%09P04-A01-CA-193%09P04-A02-CA-201%09P04-A03-CA-209%09P04-A04-CA-217%09P04-A05-CA-225%09P0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chunhuaicheng commented 4 years ago

Just realized this was already reported so I'm closing this thread.