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Urinx / alphafold_pytorch

An implementation of the DeepMind's AlphaFold based on PyTorch for research
Apache License 2.0
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Problem running octave plmDCA.m test_data/T1019s2.aln #14

Open Maj18 opened 3 years ago

Maj18 commented 3 years ago

Hej, I tried to run plmDCA.m test_data/T1019s2.aln, but I got the following error: octave: no graphical display found octave: disabling GUI features

N = 88 B_with_id_seq = 393 B = 393 B_eff = 393.00 q = 22

Minimizing g_r for node r=1 warning: non-integer range used as index warning: called from plmDCA>g_r at line 212 column 8 plmDCA>g_r at line 215 column 23 minFunc at line 314 column 10 plmDCA>min_g_r at line 206 column 7 plmDCA at line 91 column 15 error: reshape: SIZE must be non-negative error: execution exception in plmDCA.m

I don't use matlab, so can't really fix the problem. Can you please help me out? Thank you! Maj

challengesll commented 3 years ago

you can try octave --no-gui -W plmDCA.m $aln for solving your problem.