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VCCRI / GEOracle

GNU General Public License v3.0
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Error when trying to "Process GSE list" #2

Open MarcZimmerli opened 2 years ago

MarcZimmerli commented 2 years ago

Interesting tool - sounds very useful.

After changing the host.ID as suggested in the other Issue (in my case changed it to dec2021.archive.ensembl.org) , the Interface started up as intended and allowed querying the GEO database.

However, when trying to "Process GSE list" i get the error messages Screenshot (288) I used the provided example GSE-ID list ("TGFB_Case_Study_GSE_IDs.txt") to make sure the problem doesn't stem from an issue with my own list. I used R version 4.0.3 but also tried it on a clean new installation of R 4.1.3

Tried some troubleshooting myself but didn't find any fix so any input/idea on what might cause this issue would be greatly appreciated.

zx-morningstar commented 1 year ago

Hi, @davhum @hojwk @djevic I got same problem, could you reply this?