added SEQR + seqr-db - Githubissues

VDBWRAIR / compare_blast

compare blastx and the like

MIT License

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Closed averagehat closed 9 years ago

averagehat commented 9 years ago

Adding seqr into the makefile. Currently seqr requires java 8. module load java/jdk1.8

necrolyte2 commented 9 years ago

Add this to top so the report target will run on it as well. You also don't seem to be creating the tsv file for sqr

SQROUTPUT = single_cp_multi_thread_seqr.$(AVAILCPU).$(SUBSELECT).tsv
TSVOUTPUT = $(BLASTOUTPUT) $(DIAMONDOUTPUT) $(SQROUTPUT)

averagehat commented 9 years ago

I got confused, I failed to pull your changes, should be good now

necrolyte2 commented 9 years ago

Looks good to me