Mbio apps: Unable to make compute request... 500

[asizemore]

We get this message on only some pairs of config. Get this error with

• Family and q3
• Genus and median

But all works fine with

• Family and median
• Genus and q3

It's not just DailyBaby. Also seen in CAMP

So far i've only seen this error when the compute had already Completed. I haven't yet seen it immediately after I run the compute.

[Foxcapades]

This may be related to a misfired attempt to clear the cache. For some reason the postgres instance backing compute was not cleared as expected and now has a bunch of dead job references.

On the backend we are seeing this error:

java.lang.IllegalStateException: Attempted to lookup result files from nonexistent workspace 04fc82883614bcc12a5a8d2d57d21af7
        at org.veupathdb.lib.compute.platform.intern.s3.S3.getNonReservedFiles(S3.kt:142) ~[service.jar:1.0.0]
        at org.veupathdb.lib.compute.platform.AsyncPlatform.getJobFiles(AsyncPlatform.kt:200) ~[service.jar:1.0.0]
        at org.veupathdb.service.eda.compute.EDA.getComputeJobFiles(EDA.kt:189) ~[service.jar:1.0.0]
        at org.veupathdb.service.eda.compute.controller.ComputeController.resultFile(ComputeController.java:212) ~[service.jar:1.0.0]
        at org.veupathdb.service.eda.compute.controller.ComputeController.postComputesRankedabundanceByFile(ComputeController.java:109) ~[service.jar:1.0.0]
        at jdk.internal.reflect.DirectMethodHandleAccessor.invoke(DirectMethodHandleAccessor.java:104) ~[?:?]
        at java.lang.reflect.Method.invoke(Method.java:577) ~[?:?]
        at org.glassfish.jersey.server.model.internal.ResourceMethodInvocationHandlerFactory.lambda$static$0(ResourceMethodInvocationHandlerFactory.java:52) ~[service.jar:1.0.0]
        at org.glassfish.jersey.server.model.internal.AbstractJavaResourceMethodDispatcher$1.run(AbstractJavaResourceMethodDispatcher.java:134) ~[service.jar:1.0.0]
        at org.glassfish.jersey.server.model.internal.AbstractJavaResourceMethodDispatcher.invoke(AbstractJavaResourceMethodDispatcher.java:177) ~[service.jar:1.0.0]
        at org.glassfish.jersey.server.model.internal.JavaResourceMethodDispatcherProvider$ResponseOutInvoker.doDispatch(JavaResourceMethodDispatcherProvider.java:176) ~[service.jar:1.0.0]
        at org.glassfish.jersey.server.model.internal.AbstractJavaResourceMethodDispatcher.dispatch(AbstractJavaResourceMethodDispatcher.java:81) ~[service.jar:1.0.0]
        at org.glassfish.jersey.server.model.ResourceMethodInvoker.invoke(ResourceMethodInvoker.java:478) ~[service.jar:1.0.0]
        at org.glassfish.jersey.server.model.ResourceMethodInvoker.apply(ResourceMethodInvoker.java:400) ~[service.jar:1.0.0]
        at org.glassfish.jersey.server.model.ResourceMethodInvoker.apply(ResourceMethodInvoker.java:81) ~[service.jar:1.0.0]
        at org.glassfish.jersey.server.ServerRuntime$1.run(ServerRuntime.java:261) ~[service.jar:1.0.0]
        at org.glassfish.jersey.internal.Errors$1.call(Errors.java:248) ~[service.jar:1.0.0]
        at org.glassfish.jersey.internal.Errors$1.call(Errors.java:244) ~[service.jar:1.0.0]
        at org.glassfish.jersey.internal.Errors.process(Errors.java:292) ~[service.jar:1.0.0]
        at org.glassfish.jersey.internal.Errors.process(Errors.java:274) ~[service.jar:1.0.0]
        at org.glassfish.jersey.internal.Errors.process(Errors.java:244) ~[service.jar:1.0.0]
        at org.glassfish.jersey.process.internal.RequestScope.runInScope(RequestScope.java:265) ~[service.jar:1.0.0]
        at org.glassfish.jersey.server.ServerRuntime.process(ServerRuntime.java:240) ~[service.jar:1.0.0]
        at org.glassfish.jersey.server.ApplicationHandler.handle(ApplicationHandler.java:697) ~[service.jar:1.0.0]
        at org.glassfish.jersey.grizzly2.httpserver.GrizzlyHttpContainer.service(GrizzlyHttpContainer.java:367) ~[service.jar:1.0.0]
        at org.glassfish.grizzly.http.server.HttpHandler$1.run(HttpHandler.java:190) ~[service.jar:1.0.0]
        at org.glassfish.grizzly.threadpool.AbstractThreadPool$Worker.doWork(AbstractThreadPool.java:535) ~[service.jar:1.0.0]
        at org.glassfish.grizzly.threadpool.AbstractThreadPool$Worker.run(AbstractThreadPool.java:515) ~[service.jar:1.0.0]
        at java.lang.Thread.run(Thread.java:833) ~[?:?]

[asizemore]

Now on QA:

Success!! Closing ticket!