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VEuPathDB / EdaNewIssues

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Map - standalone map floater overlay breaks with quote character in values #645

Closed bobular closed 1 year ago

bobular commented 1 year ago

e.g. SCORE S. Mansoni Any floater, overlay with Country. The ' in Cote d'Ivoire is the problem.

Looks like an R issue

Caused by: org.rosuda.REngine.Rserve.RserveException: eval failed, request status: R parser: syntax error
        at org.rosuda.REngine.Rserve.RConnection.eval(RConnection.java:261) ~[service.jar:3.0.0]
        at org.veupathdb.service.eda.common.plugin.util.RServeClient.streamResult(RServeClient.java:114) ~[service.jar:3.0.0]
        at org.veupathdb.service.eda.ds.plugin.standalonemap.FloatingLineplotPlugin.lambda$writeResults$0(FloatingLineplotPlugin.java:157) ~[service.jar:3.0.0]
        at org.veupathdb.service.eda.common.plugin.util.RServeClient.lambda$useRConnectionWithProcessedRemoteFiles$1(RServeClient.java:73) ~[service.jar:3.0.0]
        at org.veupathdb.service.eda.common.plugin.util.RServeClient.useRConnection(RServeClient.java:32) ~[service.jar:3.0.0]
bobular commented 1 year ago

Closed as a duplicate of https://github.com/VEuPathDB/EdaDataService/issues/274