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VEuPathDB
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lib-eda-subsetting
Provides Java interface to query and provide EDA data and metadata from a database
Apache License 2.0
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Coerce int range filter values for accuracy and rename some methods for clarity
#53
ryanrdoherty
opened
1 month ago
0
Add unit tests and minor refactoring
#52
dmgaldi
closed
2 months ago
1
Fix distribution query to work with Oracle or Postgres
#51
dmgaldi
closed
2 months ago
0
Quote the column names in order by clause to account for case-sensitivity
#50
dmgaldi
opened
3 months ago
0
Add support for postgres when checking existence of wide table
#49
dmgaldi
closed
4 months ago
0
String optimizations
#48
dmgaldi
closed
5 months ago
0
Check if wide table is available for Entities
#47
dmgaldi
closed
6 months ago
0
Remove hack distinct
#46
dmgaldi
closed
6 months ago
0
Remove entity ordering for user dataset entity tree queries
#45
dmgaldi
closed
6 months ago
0
Place NULLs last when sorting and clean up logs
#42
dmgaldi
closed
10 months ago
0
Add annotations to mbio data to help determine appropriate apps
#43
asizemore
opened
10 months ago
1
Add a log line for debugging
#41
dmgaldi
closed
10 months ago
0
Map - default variable for bubble markers in megastudy is super-slow - think about improving default variable configuration
#44
bobular
opened
10 months ago
0
Binary file metadata not found
#40
dmgaldi
opened
10 months ago
1
Ensure code can't get out of sync with binary files
#39
dmgaldi
closed
11 months ago
0
Binary files floating point fixes
#38
dmgaldi
closed
11 months ago
1
Add iterator-based APIs for consolidated EDA
#37
dmgaldi
closed
12 months ago
0
Add attribute to study details to indicate presence of geographic attributes
#36
dmgaldi
closed
1 year ago
1
Allow broader-typed numeric collections to have more specific-typed numeric vars
#35
dmgaldi
closed
10 months ago
0
remove collection validation
#34
dmgaldi
closed
1 year ago
0
Add new annotations for impute zeroes
#33
dmgaldi
closed
1 year ago
0
Add new collection properties
#32
dmgaldi
closed
1 year ago
0
Read variable scale prop from DB and make available on FloatingPointVariables
#31
ryanrdoherty
closed
1 year ago
0
Quote column names in wide tabular SQL
#30
dmgaldi
closed
1 year ago
0
study vocab filters
#29
dmgaldi
closed
1 year ago
0
Add string collection to lib subsetting
#28
dmgaldi
closed
1 year ago
0
study vocab
#27
dmgaldi
closed
1 year ago
0
Implement consolidated counts API
#26
dmgaldi
opened
1 year ago
0
Add modification date to study
#25
dmgaldi
closed
1 year ago
0
Produce full set of binary files for megastudy
#24
dmgaldi
closed
1 year ago
6
Minimize checks for study binary files
#23
ryanrdoherty
closed
1 year ago
0
Only check files once when getting binary metadata
#22
dmgaldi
closed
1 year ago
0
Use UTF-8 Encoded files for output variables instead of deserializing and re-encoding
#21
dmgaldi
closed
1 year ago
0
Skip string when encoding as UTF-8
#20
dmgaldi
closed
1 year ago
1
New variable-length string binary format
#19
dmgaldi
closed
1 year ago
0
Add a file-based entity count implementation
#18
dmgaldi
closed
1 year ago
0
Add github workflow with gradle build
#17
dmgaldi
closed
1 year ago
0
Close all resources opened by file-based subetting
#16
dmgaldi
closed
2 years ago
0
ArrayList Optimizations and Byte deserialization optimizations
#15
dmgaldi
closed
2 years ago
0
Implemented study finder for searching file system for studies available to service
#14
dmgaldi
closed
2 years ago
0
Handle variable-length string IDs in binary files
#13
dmgaldi
closed
2 years ago
0
Fix multi-value var bugs and ancestor expander bugs
#12
dmgaldi
closed
2 years ago
0
multi
#11
dmgaldi
closed
2 years ago
0
Output string IDs instead of ID indexes and wire up DataSource param
#10
dmgaldi
closed
2 years ago
0
Format dates as longs and implement multi-filters
#9
dmgaldi
closed
2 years ago
0
Implement data flow map reduce tree construction
#8
dmgaldi
closed
2 years ago
0
Implement map-reduce tree traversal
#7
dmgaldi
closed
2 years ago
0
Performance optimizations for lib-eda-subsetting
#6
dmgaldi
closed
2 years ago
0
Added root node implementation of map reduce sans children
#5
dmgaldi
closed
2 years ago
0
Implement ancestor mappers for going from descendants to ancestors and vice versa
#4
dmgaldi
closed
2 years ago
0
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