VEuPathDB / microbiomeComputations

1 stars 0 forks source link

Correlation sample metadata error #87

Open asizemore opened 6 months ago

asizemore commented 6 months ago

Seen on jb's dev site with lee gambien data. I've seen this before elsewhere but it resolved itself...

Error in SampleMetadata(data = sampleMetadata, recordIdColumn = "OBI_0000626.DnaSequencingAssay_stable_id",  :
  could not find function "SampleMetadata"
In addition: Warning messages:
1: In data.table::fread("correlation_input", select = c(OBI_0000626.DnaSequencingAssay_stable_id = "double",  :
  Attempt to override column 1 <<OBI_0000626.DnaSequencingAssay_stable_id>> of inherent type 'string' down to 'float64' ignored. Only overrides to a higher type are currently supported. If this was intended, please coerce to the lower type afterwards.
Screen Shot 2024-02-22 at 9 40 55 AM