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VEuPathDB / service-eda

Repo containing EDA web service
Apache License 2.0
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Fix subsetting on string variables with newlines #23

Open dmgaldi opened 4 months ago

dmgaldi commented 4 months ago

Overview

Example

OBI_0001622 has newlines in the megastudy which breaks the CSV parser in merging component.

{
    "studyId": "VBP_MEGA",
    "derivedVariables": [],
    "filters": [],
    "entityId": "GAZ_00000448",
    "outputVariables": [
        {
            "entityId": "GAZ_00000448",
            "variableId": "EUPATH_0043203"
        },
        {
            "entityId": "GAZ_00000448",
            "variableId": "OBI_0001620"
        },
        {
            "entityId": "GAZ_00000448",
            "variableId": "OBI_0001621"
        },
        {
            "entityId": "EUPATH_0000605",
            "variableId": "OBI_0001622"
        }
    ]
}