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VEuPathDB / service-eda

Repo containing EDA web service
Apache License 2.0
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eda compute: Failed to test if object.... #36

Open aurreco-uga opened 3 months ago

aurreco-uga commented 3 months ago 
2024-05-09 23:34:47.480 [rid:4Xkb9][jid:][p:] DEBUG BucketObjectContainer:35 - Attempting to test whether Bucket{ name='eda-compute-prod' } contains object '13595e3a536e5d5695652dea7a31b096/.workspace'
2024-05-09 23:34:47.539 [rid:4Xkb9][jid:][p:] ERROR ErrorMapper:68 - Caught Exception:
 org.veupathdb.lib.s3.workspaces.WorkspaceAlreadyExistsError: Could not create a workspace for 13595e3a536e5d5695652dea7a31b096 as a workspace already exists with that ID
        at org.veupathdb.lib.s3.workspaces.S3WorkspaceFactory.create(S3WorkspaceFactory.kt:152) ~[service.jar:3.0.0]
aurreco-uga commented 3 months ago

postgres out of sync with minio, there is a fix for 69

aurreco-uga commented 3 months ago

patched May 17 end of day https://github.com/VEuPathDB/tagger/pull/59

aurreco-uga commented 3 months ago

still happening try https://microbiomedb.org/analysis/pZ7JWcu

aurreco-uga commented 2 months ago

this seems fixed...

the one difficult to reproduce now is: Failed to test if object '1cc2f8512d8a2d7db02534ca7ba88be4/.workspace' exists in Bucket

updating teh title. the user can reload the page and next time it works.

it is related to replication.. ellie cant reproduce locally...

aurreco-uga commented 3 weeks ago

easy to replicate when trying to rerun an expired job. fut on Aug 16 2024, ellie fixing it. https://github.com/VEuPathDB/lib-s3-workspace/issues/6

Foxcapades commented 3 weeks ago

Issue is a bug in MinIO, the workspace library will be patched to account for this bug: https://github.com/VEuPathDB/lib-s3-workspace/issues/6