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VEuPathDB
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veupathUtils
A collection of general purpose R helper functions for use in the VEuPathDB project.
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warning rather than error for non-cont vars in correlation inputs
#48
d-callan
closed
4 months ago
0
improve messaging in correlation method
#47
d-callan
closed
4 months ago
2
Get arbitrary vars
#46
d-callan
closed
4 months ago
0
add region to 16s collection names
#45
d-callan
closed
5 months ago
0
Impute zero fix
#44
d-callan
closed
5 months ago
1
allow metadata to be data1 for correlation results
#43
d-callan
closed
5 months ago
0
CollectionWithMetadata class
#42
d-callan
closed
5 months ago
0
fill computationDetails for correlation compute results
#41
d-callan
closed
6 months ago
0
fix integer bins closed left
#40
d-callan
closed
6 months ago
0
Refactor computes and correlations generic classes and methods
#39
d-callan
closed
6 months ago
0
Megastudy performance imputing zeroes
#38
d-callan
closed
6 months ago
0
fix integer bins w width of 1
#37
d-callan
closed
6 months ago
0
General Backend R: Migrate general-purpose compute-related stuffs out of microbiomeComputations
#36
d-callan
closed
6 months ago
0
Improve display labels returned from getDiscretizedBins
#35
d-callan
opened
8 months ago
1
Fix lost study vocabs
#34
d-callan
closed
8 months ago
1
handle empty plotref in tojson method
#33
d-callan
closed
8 months ago
0
Improving megastudy zero imputation
#32
d-callan
closed
8 months ago
0
Map - imputing zeroes doesn't seem to impute enough zeroes
#31
bobular
opened
9 months ago
9
Map - profile megastudy/zero imputation-related methods
#30
bobular
opened
10 months ago
1
allow BinLists to have only one bin
#29
asizemore
closed
11 months ago
0
add as.numeric for bins
#28
asizemore
closed
1 year ago
0
add helper to convert binstarts and ends to numeric
#27
asizemore
closed
1 year ago
0
Impute zeroes variable collections
#26
d-callan
closed
1 year ago
0
fix collate issue
#25
asizemore
closed
1 year ago
0
Map Imputing Zeroes: refactor R util function
#24
d-callan
opened
1 year ago
0
Map Impute Zeroes: need R utility function to impute zeroes for tall megastudies
#23
d-callan
closed
1 year ago
0
Add method that checks if two BinLists overlap
#22
asizemore
opened
1 year ago
0
BinList does not accept a list of one?
#21
asizemore
closed
11 months ago
0
export findNumericCols
#20
asizemore
closed
12 months ago
1
impute zeroes on tall megastudies
#19
d-callan
closed
1 year ago
4
add bin helper functions
#18
asizemore
closed
1 year ago
1
Add dropZeroColumns function
#17
asizemore
closed
1 year ago
1
improve getDiscretizedBins handling dates
#16
asizemore
closed
1 year ago
0
getDiscretizedBins error: overlapping bins (from `filter-aware-metadata/continuous-variable`)
#15
asizemore
closed
1 year ago
0
filter-aware-metadata/continuous-variable is returning extra `value: null` in `binRanges.*`
#13
bobular
closed
1 year ago
2
Floating chart continuous overlays
#12
d-callan
closed
1 year ago
7
2x2 stats table
#11
d-callan
closed
1 year ago
1
Handle case where collection has no members
#10
asizemore
closed
1 year ago
1
helpers for integrating computed variables
#9
d-callan
closed
1 year ago
1
Refactor computed variable metadata
#8
d-callan
closed
1 year ago
1
Create dev container
#7
asizemore
closed
1 year ago
3
warnWithTime and stopWithTime
#6
d-callan
opened
2 years ago
0
rename me
#5
d-callan
opened
2 years ago
0
Feature/3/impute0s
#4
asizemore
closed
2 years ago
5
Backend: Optionally impute 0s for numeric terms.
#3
d-callan
closed
2 years ago
2
strSplit breaks for some edge cases
#2
d-callan
opened
2 years ago
0
matchArg types and their conversion seem unintuitive
#1
d-callan
opened
2 years ago
0