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Cannot find file "ndarray_exports.h" #10

Closed grandyang closed 6 years ago

grandyang commented 6 years ago

Hi

I have the following error:

../cnn-crf-stereo/dependencies/imageutilities/tests/../src/ndarray/ndarray_mem.h:8:29: fatal error: ndarray_exports.h: No such file or directory

include "ndarray_exports.h"

                         ^

compilation terminated. make[2]: [tests/ndarrayTest/CMakeFiles/ndarrayTest.dir/ndarray_example.cpp.o] Error 1 make[1]: [tests/ndarrayTest/CMakeFiles/ndarrayTest.dir/all] Error 2 make: *** [all] Error 2

Do you know where I can get the "ndarray_exports.h" file?

pknoebelreiter commented 6 years ago

Hi,

which operating system and which cuda version do you use? What is the CMake output?

grandyang commented 6 years ago

I am using CentOS 7, CUDA 9.1, here is the CMake output:

WRONG CUDA_SDK_ROOT_DIR:/usr/local/cuda-9.1 COMPILER FLAGS: CMAKE_BUILD_TYPE: RelWithDebInfo BUILD_SHARED_LIBS: ON CMAKE_C_FLAGS= CMAKE_CXX_FLAGS = -std=c++11 -fPIC -fmax-errors=3 -fpermissive -ggdb -Wunused-result -Wno-unused-variable -Wno-unused-value -Wno-unused-but-set-variable -Wdisabled-optimization -Wdiv-by-zero -Wc++11-compat -Wno-float-equal -fopenmp -O2 -DPARALLEL -ffast-math -DNDEBUG CMAKE_CXX_FLAGS_RELEASE = -O2 -DNDEBUG CUDA_NVCC_FLAGS= -arch=sm_30;-expt-extended-lambda;-ftemplate-backtrace-limit=2;-lineinfo;-std=c++11;-Xcompiler=-Wno-sign-compare;-O2;-keep;-src-in-ptx;-DNDEBUG;-Xptxas=-warn-lmem-usage;-Xptxas=-warn-spills CUDA_PROPAGATE_HOST_FLAGS= OFF COMPILE_DEFINITIONS = [-] ImageUtilities omitting IO module [+] ImageUtilities include GUI module [+] ImageUtilities include Math module [-] do not build static library [-] insufficient gcc version, building without ndarray NDARRAY_LIB= additional iuio libs: install: /usr/local Configuring done Generating done

pknoebelreiter commented 6 years ago

I see several potential problems:

grandyang commented 6 years ago

I changed to Ubuntu 16.04, and get the imageutilities installed successfully.

But when I am compiling the slackprop, I have the following error:

_CMake Error at CMakeLists.txt:33 (find_package): By not providing "FindImageUtilities.cmake" in CMAKE_MODULE_PATH this project has asked CMake to find a package configuration file provided by "ImageUtilities", but CMake did not find one.

Could not find a package configuration file provided by "ImageUtilities" with any of the following names:

ImageUtilitiesConfig.cmake
imageutilities-config.cmake

Add the installation prefix of "ImageUtilities" to CMAKE_PREFIX_PATH or set "ImageUtilitiesDIR" to a directory containing one of the above files. If "ImageUtilities" provides a separate development package or SDK, be sure it has been installed.

I have tried to add the following in the .bashrc export ImageUtilities_DIR=/home/myName/Documents/cnn-crf-stereo/dependencies/imageutilities

But not working, so I tried the following line: cmake -D ImageUtilities_DIR=/home/myName/Documents/cnn-crf-stereo/dependencies/imageutilities ..

It seems that iucore cannot be found:

_-- Looking for pthread.h -- Looking for pthread.h - found -- Looking for pthread_create -- Looking for pthread_create - not found -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE
-- Found CUDA: /usr/local/cuda (found suitable version "9.1", minimum required is "5.0") COMPILER FLAGS: -- CMAKE_BUILD_TYPE: Release -- BUILD_SHARED_LIBS: ON -- CMAKE_C_FLAGS= -- CMAKE_CXX_FLAGS = -std=c++11 -fPIC -fmax-errors=3 -fpermissive -ggdb -Wunused-result -Wno-unused-variable -Wno-unused-value -Wno-unused-but-set-variable -Wdisabled-optimization -Wdiv-by-zero -Wc++11-compat -Wno-float-equal -fopenmp -O2 -DPARALLEL -ffast-math -DNDEBUG -- CMAKE_CXX_FLAGS_RELEASE = -O3 -DNDEBUG -- CUDA_NVCC_FLAGS= -arch=sm_30;-expt-extended-lambda;-ftemplate-backtrace-limit=2;-lineinfo;-std=c++11;-Xcompiler=-Wno-sign-compare;-O2;-keep;-src-in-ptx;-DNDEBUG;-Xptxas=-warn-lmem-usage;-Xptxas=-warn-spills -- CUDA_PROPAGATE_HOST_FLAGS= OFF -- COMPILE_DEFINITIONS = -- Imageutilities requested components: iucore;ndarray CMake Error at /home/xiaochen/Documents/cnn-crf-stereo/dependencies/imageutilities/ImageUtilitiesConfig.cmake:136 (message): iucore marked as required but not found Call Stack (most recent call first): CMakeLists.txt:33 (findpackage)

Do you have a clue how to fix it? Thanks a lot!

pknoebelreiter commented 6 years ago

We are looking for an environment variable "IMAGEUTILITIES_ROOT" in the slackprop CMake file, i.e., you must set this environment variable in your .bashrc. My entry looks like

export IMAGEUTILITIES_ROOT=/home/myName/cnn-crf-stereo/dependencies/imageutilities

You don't need to set ImageUtilities_DIR, if everything is set up correctly, CMake will find it automatically. It is important that the IMAGEUTILITIES_ROOT environment variable is set before you configure the imageutilities with CMake. Also make sure you install the imageutilities using

make install

If everything worked correctly, you should additionally have the folders "include" and "lib" in your $IMAGEUTILITIES_ROOT folder. Then slackprop will find the imageutilities package.

TrackingBird commented 6 years ago

Dear pknoebelreiter，I have compile the MAGEUTILITIES successfully，Is there any difference from your environment variable sudo gedit ～/.bashrc export IMAGEUTILITIES_ROOT=/home/jennifer/cnn-crf-stereo-master/dependencies/imageutilities export CUDA_SDK_ROOT_DIR=/usr/local/cuda/samples/ export COMPUTE_CAPABILITY=3.5 export IMAGEUTILITIES_ROOT=/usr/local/MATLAB/R2016b source ～/.bashrc In slackprop, I got the error,Do you have a clue how to fix it? Thanks a lot. CMake Error at CMakeLists.txt:33 (find_package): By not providing "FindImageUtilities.cmake" in CMAKE_MODULE_PATH this project has asked CMake to find a package configuration file provided by "ImageUtilities", but CMake did not find one.

Could not find a package configuration file provided by "ImageUtilities" with any of the following names:

ImageUtilitiesConfig.cmake
imageutilities-config.cmake

Add the installation prefix of "ImageUtilities" to CMAKE_PREFIX_PATH or set "ImageUtilities_DIR" to a directory containing one of the above files. If "ImageUtilities" provides a separate development package or SDK, be sure it has been installed.

while the folders "include" and "lib" are putted in /usr/local/, here is the log： Install the project... -- Install configuration: "RelWithDebInfo" -- Installing: /usr/local/lib/libiucore.so.2.1.0 -- Up-to-date: /usr/local/lib/libiucore.so.2.10 -- Up-to-date: /usr/local/lib/libiucore.so -- Up-to-date: /usr/local/include/iu/iugui.h -- Up-to-date: /usr/local/include/iu/iumath.h -- Up-to-date: /usr/local/include/iu/iudefs.h -- Up-to-date: /usr/local/include/iu/iucutil.h -- Up-to-date: /usr/local/include/iu/iucore.h -- Up-to-date: /usr/local/include/iu/iuhelpermath.h -- Installing: /usr/local/lib/libiugui.so.2.1.0 -- Up-to-date: /usr/local/lib/libiugui.so.2.10 -- Up-to-date: /usr/local/lib/libiugui.so -- Installing: /usr/local/lib/libiumath.so.2.1.0 -- Up-to-date: /usr/local/lib/libiumath.so.2.10 -- Up-to-date: /usr/local/lib/libiumath.so -- Up-to-date: /usr/local/include/iu/iucore/iucoreapi.h -- Up-to-date: /usr/local/include/iu/iucore/coredefs.h -- Up-to-date: /usr/local/include/iu/iucore/memorydefs.h -- Up-to-date: /usr/local/include/iu/iucore/linearmemory.h -- Up-to-date: /usr/local/include/iu/iucore/linearhostmemory.h -- Up-to-date: /usr/local/include/iu/iucore/lineardevicememory.h -- Up-to-date: /usr/local/include/iu/iucore/tensor_cpu.h -- Up-to-date: /usr/local/include/iu/iucore/tensor_gpu.h -- Up-to-date: /usr/local/include/iu/iucore/image.h -- Up-to-date: /usr/local/include/iu/iucore/image_allocator_cpu.h -- Up-to-date: /usr/local/include/iu/iucore/image_cpu.h -- Up-to-date: /usr/local/include/iu/iucore/image_allocator_gpu.h -- Up-to-date: /usr/local/include/iu/iucore/image_gpu.h -- Up-to-date: /usr/local/include/iu/iucore/volume.h -- Up-to-date: /usr/local/include/iu/iucore/volume_allocator_cpu.h -- Up-to-date: /usr/local/include/iu/iucore/volume_cpu.h -- Up-to-date: /usr/local/include/iu/iucore/volume_allocator_gpu.h -- Up-to-date: /usr/local/include/iu/iucore/volume_gpu.h -- Up-to-date: /usr/local/include/iu/iucore/copy.h -- Up-to-date: /usr/local/include/iu/iucore/vector.h -- Up-to-date: /usr/local/include/iu/common/derivative_kernels.cuh -- Up-to-date: /usr/local/include/iu/common/bind_textures.cuh -- Up-to-date: /usr/local/include/iu/iugui/qt5imagegpuwidget.h -- Up-to-date: /usr/local/include/iu/iugui/qt5disparitymapgpuwidget.h -- Up-to-date: /usr/local/include/iu/iugui/iuguiapi.h -- Up-to-date: /usr/local/include/iu/iumath/iumathapi.h -- Up-to-date: /usr/local/include/iu/iumath/typetraits.h -- Up-to-date: /usr/local/include/iu/iugui.h -- Up-to-date: /usr/local/include/iu/iumath.h -- Up-to-date: /usr/local/include/iu/iudefs.h -- Up-to-date: /usr/local/include/iu/iucutil.h -- Up-to-date: /usr/local/include/iu/iucore.h -- Up-to-date: /usr/local/include/iu/iuhelpermath.h -- Up-to-date: /usr/local/cmake/FindFlyCapture2.cmake -- Installing: /usr/local/lib/libndarray.so.1 -- Up-to-date: /usr/local/lib/libndarray.so -- Up-to-date: /usr/local/include/iu/ndarray/ndarray_ref.host.h -- Up-to-date: /usr/local/include/iu/ndarray/ndarray_iterator_div.h -- Up-to-date: /usr/local/include/iu/ndarray/ndarray_iterator.h -- Up-to-date: /usr/local/include/iu/ndarray/ndarray_iterator_over.h -- Up-to-date: /usr/local/include/iu/ndarray/bit_index.h -- Up-to-date: /usr/local/include/iu/ndarray/ndarray_ref.kernel.h -- Up-to-date: /usr/local/include/iu/ndarray/mex_io.h -- Up-to-date: /usr/local/include/iu/ndarray/ndarray_iu.h -- Up-to-date: /usr/local/include/iu/ndarray/type_expand_cuda.h -- Up-to-date: /usr/local/include/iu/ndarray/stacktrace.h -- Up-to-date: /usr/local/include/iu/ndarray/options.h -- Up-to-date: /usr/local/include/iu/ndarray/ndarray_print.h -- Up-to-date: /usr/local/include/iu/ndarray/intn.h -- Up-to-date: /usr/local/include/iu/ndarray/type_name.h -- Up-to-date: /usr/local/include/iu/ndarray/tests.h -- Up-to-date: /usr/local/include/iu/ndarray/common_transforms.h -- Up-to-date: /usr/local/include/iu/ndarray/error_cuda.h -- Up-to-date: /usr/local/include/iu/ndarray/ndarray_io.h -- Up-to-date: /usr/local/include/iu/ndarray/functor.h -- Up-to-date: /usr/local/include/iu/ndarray/common_transforms.h -- Up-to-date: /usr/local/include/iu/ndarray/transform.h -- Up-to-date: /usr/local/include/iu/ndarray/transform.h -- Up-to-date: /usr/local/include/iu/ndarray/ndarray.h -- Up-to-date: /usr/local/include/iu/ndarray/ndarray_mem.h -- Up-to-date: /usr/local/include/iu/ndarray/transform.h -- Up-to-date: /usr/local/include/iu/ndarray/error.kernel.h -- Up-to-date: /usr/local/include/iu/ndarray/ndarray_op.h -- Up-to-date: /usr/local/include/iu/ndarray/error.h -- Up-to-date: /usr/local/include/iu/ndarray/defines.h -- Up-to-date: /usr/local/include/iu/ndarray/ndarray_op.cuh -- Up-to-date: /usr/local/include/iu/ndarray/transform.cuh -- Up-to-date: /usr/local/include/iu/ndarray/transform.cuh -- Up-to-date: /usr/local/include/iu/ndarray/transform.cuh -- Up-to-date: /usr/local/include/ndarray_exports.h

khammernik commented 6 years ago

Hi,

you overwrite the environment variable IMAGEUTILITIES_ROOT in your .bashrc:

export IMAGEUTILITIES_ROOT=/usr/local/MATLAB/R2016b

This variable should be MATLAB_ROOT.

TrackingBird commented 6 years ago

Oh my god, thanks khammernik. I did not noticed it before