ahojukka5
commented
6 months ago Input file:
{
"model": {
"name": "tungsten",
"params": {
"n0": -0.10,
"alpha": 0.50,
"n_sol": -0.047,
"n_vap": -0.464,
"T": 3300.0,
"T0": 156000.0,
"Bx": 0.8582,
"alpha_farTol": 0.001,
"alpha_highOrd": 4,
"lambda": 0.22,
"stabP": 0.2,
"shift_u": 0.3341,
"shift_s": 0.1898,
"p2": 1.0,
"p3": -0.5,
"p4": 0.333333333,
"q20": -0.0037,
"q21": 1.0,
"q30": -12.4567,
"q31": 20.0,
"q40": 45.0
}
},
"Lx": 128,
"Ly": 128,
"Lz": 128,
"dx": 1.1,
"dy": 1.1,
"dz": 1.1,
"origo": "center",
"t0": 0.0,
"t1": 10.0,
"dt": 1.0,
"saveat": 1.0,
"results": "/tmp/psi_%d.bin",
"fields": [
{
"name": "psi",
"data": "/tmp/pfc/tungsten/psi_%d.bin"
}
],
"initial_conditions": [
{
"type": "constant",
"n0": -0.4
},
{
"type": "single_seed",
"amp_eq": 0.216,
"rho_seed": -0.047
}
]
}Results:
MPI_Init(): initialized 1 processes
Reading simulation settings from stdin
Reading configuration from json file:
{
"Lx": 128,
"Ly": 128,
"Lz": 128,
"dt": 1.0,
"dx": 1.1,
"dy": 1.1,
"dz": 1.1,
"fields": [
{
"data": "/tmp/pfc/tungsten/psi_%d.bin",
"name": "psi"
}
],
"initial_conditions": [
{
"n0": -0.4,
"type": "constant"
},
{
"amp_eq": 0.216,
"rho_seed": -0.047,
"type": "single_seed"
}
],
"model": {
"name": "tungsten",
"params": {
"Bx": 0.8582,
"T": 3300.0,
"T0": 156000.0,
"alpha": 0.5,
"alpha_farTol": 0.001,
"alpha_highOrd": 4,
"lambda": 0.22,
"n0": -0.1,
"n_sol": -0.047,
"n_vap": -0.464,
"p2": 1.0,
"p3": -0.5,
"p4": 0.333333333,
"q20": -0.0037,
"q21": 1.0,
"q30": -12.4567,
"q31": 20.0,
"q40": 45.0,
"shift_s": 0.1898,
"shift_u": 0.3341,
"stabP": 0.2
}
},
"origo": "center",
"results": "/tmp/psi_%d.bin",
"saveat": 1.0,
"t0": 0.0,
"t1": 10.0
}
World: (Lx = 128, Ly = 128, Lz = 128, x0 = -70.400, y0 = -70.400, z0 = -70.400, x1 = 70.400, y1 = 70.400, z0 = 70.400, dx = 1.100, dy = 1.100, dz = 1.100)
backend options: options = (fft1d:contiguous, mpi:alltoallv, decomposition:pencil, mpi:from-gpu)
Initializing model...
Adding results writers
Results dir "/tmp/pfc/tungsten" does not exist, creating
Writing field psi to /tmp/pfc/tungsten/psi_%d.bin
Adding initial conditions
Creating initial condition from data {"n0":-0.4,"type":"constant"}
Creating initial condition from data {"amp_eq":0.216,"rho_seed":-0.047,"type":"single_seed"}
WARNING: no boundary conditions are set!
Applying initial conditions
First increment: apply boundary conditions
Step 1 done in 0.238 s (0.173 s FFT, 0.064 s other). Simulation time: 1.000 / 10.000 (10.000 % done). ETA: 2s
Step 2 done in 0.234 s (0.169 s FFT, 0.065 s other). Simulation time: 2.000 / 10.000 (20.000 % done). ETA: 1s
Step 3 done in 0.317 s (0.238 s FFT, 0.079 s other). Simulation time: 3.000 / 10.000 (30.000 % done). ETA: 2s
Step 4 done in 0.236 s (0.170 s FFT, 0.066 s other). Simulation time: 4.000 / 10.000 (40.000 % done). ETA: 1s
Step 5 done in 0.240 s (0.175 s FFT, 0.066 s other). Simulation time: 5.000 / 10.000 (50.000 % done). ETA: 1s
Step 6 done in 0.239 s (0.173 s FFT, 0.066 s other). Simulation time: 6.000 / 10.000 (60.000 % done). ETA: 0s
Step 7 done in 0.235 s (0.169 s FFT, 0.066 s other). Simulation time: 7.000 / 10.000 (70.000 % done). ETA: 0s
Step 8 done in 0.317 s (0.238 s FFT, 0.079 s other). Simulation time: 8.000 / 10.000 (80.000 % done). ETA: 0s
Step 9 done in 0.234 s (0.168 s FFT, 0.066 s other). Simulation time: 9.000 / 10.000 (90.000 % done). ETA: 0s
Step 10 done in 0.236 s (0.169 s FFT, 0.066 s other). Simulation time: 10.000 / 10.000 (100.000 % done). ETA: 0s
Simulated 10 steps. Average times:
Step time: 0.253 s
FFT time: 0.184 s / 72.915 %
Other time: 0.068 s / 27.085 %Then
juajukka@espvm2m2007:~/dev/openpfc$ sha256sum /tmp/pfc/tungsten/*0af0ae3494c8b20db72046b3c059d4b4f266a13c58a1cd9efb71d46376390a0a /tmp/pfc/tungsten/psi_0.bin
d721435c27fe3889754c0c42f60cba1fd169ed047905c9c283821a1fe89dacfb /tmp/pfc/tungsten/psi_10.bin
e6d6cad66cef37df78b86eee02f771a6b17b4dd64483c875a7db6b9f4d491b97 /tmp/pfc/tungsten/psi_1.bin
f8e5a5da0cd30313226eb08bc00982a0ce50f36771355d29696721ce82b0c2ae /tmp/pfc/tungsten/psi_2.bin
90749b405383983f258e987a7d48d5cc1fc24443dc861952ed3ef8df943bdbdc /tmp/pfc/tungsten/psi_3.bin
507fdc2ffa5e396b726a2782afc5d20fa575c92a745320b2cddebd1364256433 /tmp/pfc/tungsten/psi_4.bin
913ce1c03d2592ca7a8e4bc9f3f229ee3b03b9bf321fd3a7bb3d3525df6c865b /tmp/pfc/tungsten/psi_5.bin
f6d87c31efb3f49ba983e82476127485ccd689706c31213def170a3f001de99a /tmp/pfc/tungsten/psi_6.bin
a7d0c19a8c18207cf8abf3dc6d88c28ec9522f27668c5d973092a82f261e9f98 /tmp/pfc/tungsten/psi_7.bin
a5d6cd17b41c1c1dcd58811e4240bece295cf0805cb3e47a27480327c050fde8 /tmp/pfc/tungsten/psi_8.bin
9a56ce2b54f54fcb9db0d03bce8b4cfb9c763e63d2cfb35b967919d66522915b /tmp/pfc/tungsten/psi_9.binjuajukka@espvm2m2007:/tmp/pfc/tungsten$ rm psi_5.bin psi_6.bin psi_7.bin psi_8.bin psi_9.bin psi_10.binRestart from file 4, new json is
{
"model": {
"name": "tungsten",
"params": {
"n0": -0.10,
"alpha": 0.50,
"n_sol": -0.047,
"n_vap": -0.464,
"T": 3300.0,
"T0": 156000.0,
"Bx": 0.8582,
"alpha_farTol": 0.001,
"alpha_highOrd": 4,
"lambda": 0.22,
"stabP": 0.2,
"shift_u": 0.3341,
"shift_s": 0.1898,
"p2": 1.0,
"p3": -0.5,
"p4": 0.333333333,
"q20": -0.0037,
"q21": 1.0,
"q30": -12.4567,
"q31": 20.0,
"q40": 45.0
}
},
"Lx": 128,
"Ly": 128,
"Lz": 128,
"dx": 1.1,
"dy": 1.1,
"dz": 1.1,
"origo": "center",
"t0": 0.0,
"t1": 10.0,
"dt": 1.0,
"saveat": 1.0,
"results": "/tmp/psi_%d.bin",
"fields": [
{
"name": "psi",
"data": "/tmp/pfc/tungsten/psi_%d.bin"
}
],
"initial_conditions": [
{
"type": "from_file",
"filename": "/tmp/pfc/tungsten/psi_4.bin"
}
],
"simulator": {
"result_counter": 4,
"increment": 4
}
}Changes: change initial condition to from_file and give some initial values to result_counter and increment. Results:
MPI_Init(): initialized 1 processes
Reading input from file apps/tungsten_restart_1.json
Reading configuration from json file:
{
"Lx": 128,
"Ly": 128,
"Lz": 128,
"dt": 1.0,
"dx": 1.1,
"dy": 1.1,
"dz": 1.1,
"fields": [
{
"data": "/tmp/pfc/tungsten/psi_%d.bin",
"name": "psi"
}
],
"initial_conditions": [
{
"filename": "/tmp/pfc/tungsten/psi_4.bin",
"type": "from_file"
}
],
"model": {
"name": "tungsten",
"params": {
"Bx": 0.8582,
"T": 3300.0,
"T0": 156000.0,
"alpha": 0.5,
"alpha_farTol": 0.001,
"alpha_highOrd": 4,
"lambda": 0.22,
"n0": -0.1,
"n_sol": -0.047,
"n_vap": -0.464,
"p2": 1.0,
"p3": -0.5,
"p4": 0.333333333,
"q20": -0.0037,
"q21": 1.0,
"q30": -12.4567,
"q31": 20.0,
"q40": 45.0,
"shift_s": 0.1898,
"shift_u": 0.3341,
"stabP": 0.2
}
},
"origo": "center",
"results": "/tmp/psi_%d.bin",
"saveat": 1.0,
"simulator": {
"increment": 4,
"result_counter": 4
},
"t0": 0.0,
"t1": 10.0
}
World: (Lx = 128, Ly = 128, Lz = 128, x0 = -70.400, y0 = -70.400, z0 = -70.400, x1 = 70.400, y1 = 70.400, z0 = 70.400, dx = 1.100, dy = 1.100, dz = 1.100)
backend options: options = (fft1d:contiguous, mpi:alltoallv, decomposition:pencil, mpi:from-gpu)
Initializing model...
Adding results writers
Warning: results dir "/tmp/pfc/tungsten" already exists
Writing field psi to /tmp/pfc/tungsten/psi_%d.bin
Adding initial conditions
Creating initial condition from data {"filename":"/tmp/pfc/tungsten/psi_4.bin","type":"from_file"}
WARNING: no boundary conditions are set!
Applying initial conditions
Reading initial condition from file/tmp/pfc/tungsten/psi_4.bin
Step 5 done in 0.239 s (0.173 s FFT, 0.066 s other). Simulation time: 5.000 / 10.000 (50.000 % done). ETA: 1s
Step 6 done in 0.231 s (0.166 s FFT, 0.065 s other). Simulation time: 6.000 / 10.000 (60.000 % done). ETA: 0s
Step 7 done in 0.235 s (0.170 s FFT, 0.065 s other). Simulation time: 7.000 / 10.000 (70.000 % done). ETA: 0s
Step 8 done in 0.236 s (0.171 s FFT, 0.065 s other). Simulation time: 8.000 / 10.000 (80.000 % done). ETA: 0s
Step 9 done in 0.233 s (0.168 s FFT, 0.065 s other). Simulation time: 9.000 / 10.000 (90.000 % done). ETA: 0s
Step 10 done in 0.233 s (0.169 s FFT, 0.064 s other). Simulation time: 10.000 / 10.000 (100.000 % done). ETA: 0s
Simulated 6 steps. Average times:
Step time: 0.235 s
FFT time: 0.169 s / 72.254 %
Other time: 0.065 s / 27.746 %Check results:
0af0ae3494c8b20db72046b3c059d4b4f266a13c58a1cd9efb71d46376390a0a /tmp/pfc/tungsten/psi_0.bin
d721435c27fe3889754c0c42f60cba1fd169ed047905c9c283821a1fe89dacfb /tmp/pfc/tungsten/psi_10.bin
e6d6cad66cef37df78b86eee02f771a6b17b4dd64483c875a7db6b9f4d491b97 /tmp/pfc/tungsten/psi_1.bin
f8e5a5da0cd30313226eb08bc00982a0ce50f36771355d29696721ce82b0c2ae /tmp/pfc/tungsten/psi_2.bin
90749b405383983f258e987a7d48d5cc1fc24443dc861952ed3ef8df943bdbdc /tmp/pfc/tungsten/psi_3.bin
507fdc2ffa5e396b726a2782afc5d20fa575c92a745320b2cddebd1364256433 /tmp/pfc/tungsten/psi_4.bin
913ce1c03d2592ca7a8e4bc9f3f229ee3b03b9bf321fd3a7bb3d3525df6c865b /tmp/pfc/tungsten/psi_5.bin
f6d87c31efb3f49ba983e82476127485ccd689706c31213def170a3f001de99a /tmp/pfc/tungsten/psi_6.bin
a7d0c19a8c18207cf8abf3dc6d88c28ec9522f27668c5d973092a82f261e9f98 /tmp/pfc/tungsten/psi_7.bin
a5d6cd17b41c1c1dcd58811e4240bece295cf0805cb3e47a27480327c050fde8 /tmp/pfc/tungsten/psi_8.bin
9a56ce2b54f54fcb9db0d03bce8b4cfb9c763e63d2cfb35b967919d66522915b /tmp/pfc/tungsten/psi_9.binFor tungsten, this seems to work just fine. Next, for aluminum, input file is
{
"model": {
"name": "aluminum",
"params": {
"n0": -0.085,
"alpha": 0.20,
"n_sol": -0.023,
"n_vap": -1.311,
"T_const": 700,
"T_min": 600,
"T_max": 800,
"T0": 89285.0,
"Bx": 0.817900686921996,
"G_grid": 0.0005,
"V_grid": 0.002,
"x_initial": 130,
"alpha_farTol": 0.001,
"alpha_highOrd": 0,
"lambda": 0.22,
"stabP": 0.0,
"shift_u": 1.0,
"shift_s": 0.0,
"p2_bar": 0.8286531831,
"p3_bar": -0.04204863,
"p4_bar": 0.007533,
"q20_bar": 0.016531729105214,
"q21_bar": 5.467,
"q30_bar": 1.7152418049986,
"q31_bar": 0.45,
"q40_bar": 0.787482
}
},
"Lx": 128,
"Ly": 128,
"Lz": 128,
"dx": 1.3603495232,
"dy": 1.3603495232,
"dz": 1.3603495232,
"origo": "corner",
"t0": 0.0,
"t1": 10.0,
"dt": 1.0,
"saveat": 1.0,
"fields": [
{
"name": "psi",
"data": "/tmp/aluminum/psi_%04d.bin"
}
],
"initial_conditions": [
{
"type": "constant",
"n0": 0.085
},
{
"type": "seed_grid_fcc",
"X0": 120.0,
"Ny": 6,
"Nz": 6,
"radius": 300.0,
"amplitude": 0.333,
"rho": -0.023
}
]
}Results:
MPI_Init(): initialized 1 processes
Reading input from file apps/aluminum_restart_0.json
Reading configuration from json file:
{
"Lx": 128,
"Ly": 128,
"Lz": 128,
"dt": 1.0,
"dx": 1.3603495232,
"dy": 1.3603495232,
"dz": 1.3603495232,
"fields": [
{
"data": "/tmp/aluminum/psi_%04d.bin",
"name": "psi"
}
],
"initial_conditions": [
{
"n0": 0.085,
"type": "constant"
},
{
"Ny": 6,
"Nz": 6,
"X0": 120.0,
"amplitude": 0.333,
"radius": 300.0,
"rho": -0.023,
"type": "seed_grid_fcc"
}
],
"model": {
"name": "aluminum",
"params": {
"Bx": 0.817900686921996,
"G_grid": 0.0005,
"T0": 89285.0,
"T_const": 700,
"T_max": 800,
"T_min": 600,
"V_grid": 0.002,
"alpha": 0.2,
"alpha_farTol": 0.001,
"alpha_highOrd": 0,
"lambda": 0.22,
"n0": -0.085,
"n_sol": -0.023,
"n_vap": -1.311,
"p2_bar": 0.8286531831,
"p3_bar": -0.04204863,
"p4_bar": 0.007533,
"q20_bar": 0.016531729105214,
"q21_bar": 5.467,
"q30_bar": 1.7152418049986,
"q31_bar": 0.45,
"q40_bar": 0.787482,
"shift_s": 0.0,
"shift_u": 1.0,
"stabP": 0.0,
"x_initial": 130
}
},
"origo": "corner",
"saveat": 1.0,
"t0": 0.0,
"t1": 10.0
}
World: (Lx = 128, Ly = 128, Lz = 128, x0 = 0.000, y0 = 0.000, z0 = 0.000, x1 = 174.125, y1 = 174.125, z0 = 174.125, dx = 1.360, dy = 1.360, dz = 1.360)
backend options: options = (fft1d:contiguous, mpi:alltoallv, decomposition:pencil, mpi:from-gpu)
Initializing model...
Adding results writers
Results dir "/tmp/aluminum" does not exist, creating
Writing field psi to /tmp/aluminum/psi_%04d.bin
Adding initial conditions
Creating initial condition from data {"n0":0.085,"type":"constant"}
Creating initial condition from data {"Ny":6,"Nz":6,"X0":120.0,"amplitude":0.333,"radius":300.0,"rho":-0.023,"type":"seed_grid_fcc"}
Parsing SeedGridFCC from json
No valid random seed detected, using default value 0.
WARNING: no boundary conditions are set!
Applying initial conditions
Generating 36 regular seeds with radius 300.000
First increment: apply boundary conditions
Step 1 done in 0.312 s (0.218 s FFT, 0.095 s other). Simulation time: 1.000 / 10.000 (10.000 % done). ETA: 2s
Step 2 done in 0.305 s (0.212 s FFT, 0.093 s other). Simulation time: 2.000 / 10.000 (20.000 % done). ETA: 2s
Step 3 done in 0.310 s (0.217 s FFT, 0.093 s other). Simulation time: 3.000 / 10.000 (30.000 % done). ETA: 2s
Step 4 done in 0.309 s (0.215 s FFT, 0.094 s other). Simulation time: 4.000 / 10.000 (40.000 % done). ETA: 1s
Step 5 done in 0.309 s (0.214 s FFT, 0.095 s other). Simulation time: 5.000 / 10.000 (50.000 % done). ETA: 1s
Step 6 done in 0.307 s (0.213 s FFT, 0.094 s other). Simulation time: 6.000 / 10.000 (60.000 % done). ETA: 1s
Step 7 done in 0.310 s (0.216 s FFT, 0.094 s other). Simulation time: 7.000 / 10.000 (70.000 % done). ETA: 0s
Step 8 done in 0.309 s (0.214 s FFT, 0.095 s other). Simulation time: 8.000 / 10.000 (80.000 % done). ETA: 0s
Step 9 done in 0.308 s (0.215 s FFT, 0.093 s other). Simulation time: 9.000 / 10.000 (90.000 % done). ETA: 0s
Step 10 done in 0.310 s (0.217 s FFT, 0.093 s other). Simulation time: 10.000 / 10.000 (100.000 % done). ETA: 0s
Simulated 10 steps. Average times:
Step time: 0.309 s
FFT time: 0.215 s / 69.601 %
Other time: 0.094 s / 30.399 %sha256sum:
f2ffde2ddeceb637b07b0eb9352a67747c6d9fa245781c6735cc93bfe4e3a43a /tmp/aluminum/psi_0000.bin
ad470dc896cf51762137917cf24df5ae9875529ad84002a82de6a7c99c9d68c9 /tmp/aluminum/psi_0001.bin
d33d76f76692451f8251f5abbe3f54ab2e0440b97a3280f3f2de3e3c509bd508 /tmp/aluminum/psi_0002.bin
022b602042392f4bc86fc2fd1bd1671494550f5e3d1c9846268d562c64e46246 /tmp/aluminum/psi_0003.bin
0afbe053ce989628ee4ac31c51a22ecafbae425ef78c01e18c9d8412c1c19eea /tmp/aluminum/psi_0004.bin
b08c7d74a8b78c0f1d352914f67bf259b2fa415092c668e81389e0011956e5b0 /tmp/aluminum/psi_0005.bin
0fbac2024490d5832cb154989d0264bbdfe026ea3679a7d7761df1529ca7a1f8 /tmp/aluminum/psi_0006.bin
52795c7d53fdeb92369e4b40cc75860fee85425580666f9f397cbd86aed72c52 /tmp/aluminum/psi_0007.bin
2236971b718988a447a3cff9ccb2fda9e9678a9db41ce0cc39465c217b672f3f /tmp/aluminum/psi_0008.bin
2970ddd2d18025e3514457988486b910aff418b10b5d598a9fccbe02f26e6364 /tmp/aluminum/psi_0009.bin
1bd6c2f3ea3a1f3ce2c2366ea0d05431848c0d33e5c2e9e6fd72f6d6e028d057 /tmp/aluminum/psi_0010.binRemove files:
juajukka@espvm2m2007:/tmp/aluminum$ rm psi_0005.bin psi_0006.bin psi_0007.bin psi_0008.bin psi_0009.bin psi_0010.binRestart, new json is:
{
"model": {
"name": "aluminum",
"params": {
"n0": -0.085,
"alpha": 0.20,
"n_sol": -0.023,
"n_vap": -1.311,
"T_const": 700,
"T_min": 600,
"T_max": 800,
"T0": 89285.0,
"Bx": 0.817900686921996,
"G_grid": 0.0005,
"V_grid": 0.002,
"x_initial": 130,
"alpha_farTol": 0.001,
"alpha_highOrd": 0,
"lambda": 0.22,
"stabP": 0.0,
"shift_u": 1.0,
"shift_s": 0.0,
"p2_bar": 0.8286531831,
"p3_bar": -0.04204863,
"p4_bar": 0.007533,
"q20_bar": 0.016531729105214,
"q21_bar": 5.467,
"q30_bar": 1.7152418049986,
"q31_bar": 0.45,
"q40_bar": 0.787482
}
},
"Lx": 128,
"Ly": 128,
"Lz": 128,
"dx": 1.3603495232,
"dy": 1.3603495232,
"dz": 1.3603495232,
"origo": "corner",
"t0": 0.0,
"t1": 10.0,
"dt": 1.0,
"saveat": 1.0,
"fields": [
{
"name": "psi",
"data": "/tmp/aluminum/psi_%04d.bin"
}
],
"initial_conditions": [
{
"type": "from_file",
"filename": "/tmp/aluminum/psi_0004.bin"
}
],
"simulator": {
"result_counter": 4,
"increment": 4
}
}Results:
MPI_Init(): initialized 1 processes
Reading input from file apps/aluminum_restart_1.json
Reading configuration from json file:
{
"Lx": 128,
"Ly": 128,
"Lz": 128,
"dt": 1.0,
"dx": 1.3603495232,
"dy": 1.3603495232,
"dz": 1.3603495232,
"fields": [
{
"data": "/tmp/aluminum/psi_%04d.bin",
"name": "psi"
}
],
"initial_conditions": [
{
"filename": "/tmp/aluminum/psi_0004.bin",
"type": "from_file"
}
],
"model": {
"name": "aluminum",
"params": {
"Bx": 0.817900686921996,
"G_grid": 0.0005,
"T0": 89285.0,
"T_const": 700,
"T_max": 800,
"T_min": 600,
"V_grid": 0.002,
"alpha": 0.2,
"alpha_farTol": 0.001,
"alpha_highOrd": 0,
"lambda": 0.22,
"n0": -0.085,
"n_sol": -0.023,
"n_vap": -1.311,
"p2_bar": 0.8286531831,
"p3_bar": -0.04204863,
"p4_bar": 0.007533,
"q20_bar": 0.016531729105214,
"q21_bar": 5.467,
"q30_bar": 1.7152418049986,
"q31_bar": 0.45,
"q40_bar": 0.787482,
"shift_s": 0.0,
"shift_u": 1.0,
"stabP": 0.0,
"x_initial": 130
}
},
"origo": "corner",
"saveat": 1.0,
"simulator": {
"increment": 4,
"result_counter": 4
},
"t0": 0.0,
"t1": 10.0
}
World: (Lx = 128, Ly = 128, Lz = 128, x0 = 0.000, y0 = 0.000, z0 = 0.000, x1 = 174.125, y1 = 174.125, z0 = 174.125, dx = 1.360, dy = 1.360, dz = 1.360)
backend options: options = (fft1d:contiguous, mpi:alltoallv, decomposition:pencil, mpi:from-gpu)
Initializing model...
Adding results writers
Warning: results dir "/tmp/aluminum" already exists
Writing field psi to /tmp/aluminum/psi_%04d.bin
Adding initial conditions
Creating initial condition from data {"filename":"/tmp/aluminum/psi_0004.bin","type":"from_file"}
WARNING: no boundary conditions are set!
Applying initial conditions
Reading initial condition from file/tmp/aluminum/psi_0004.bin
Step 5 done in 0.311 s (0.219 s FFT, 0.092 s other). Simulation time: 5.000 / 10.000 (50.000 % done). ETA: 1s
Step 6 done in 0.307 s (0.215 s FFT, 0.092 s other). Simulation time: 6.000 / 10.000 (60.000 % done). ETA: 1s
Step 7 done in 0.305 s (0.212 s FFT, 0.093 s other). Simulation time: 7.000 / 10.000 (70.000 % done). ETA: 0s
Step 8 done in 0.307 s (0.215 s FFT, 0.093 s other). Simulation time: 8.000 / 10.000 (80.000 % done). ETA: 0s
Step 9 done in 0.304 s (0.210 s FFT, 0.093 s other). Simulation time: 9.000 / 10.000 (90.000 % done). ETA: 0s
Step 10 done in 0.305 s (0.212 s FFT, 0.093 s other). Simulation time: 10.000 / 10.000 (100.000 % done). ETA: 0s
Simulated 6 steps. Average times:
Step time: 0.307 s
FFT time: 0.214 s / 69.774 %
Other time: 0.093 s / 30.226 %Checksums:
f2ffde2ddeceb637b07b0eb9352a67747c6d9fa245781c6735cc93bfe4e3a43a /tmp/aluminum/psi_0000.bin
ad470dc896cf51762137917cf24df5ae9875529ad84002a82de6a7c99c9d68c9 /tmp/aluminum/psi_0001.bin
d33d76f76692451f8251f5abbe3f54ab2e0440b97a3280f3f2de3e3c509bd508 /tmp/aluminum/psi_0002.bin
022b602042392f4bc86fc2fd1bd1671494550f5e3d1c9846268d562c64e46246 /tmp/aluminum/psi_0003.bin
0afbe053ce989628ee4ac31c51a22ecafbae425ef78c01e18c9d8412c1c19eea /tmp/aluminum/psi_0004.bin
b08c7d74a8b78c0f1d352914f67bf259b2fa415092c668e81389e0011956e5b0 /tmp/aluminum/psi_0005.bin
0fbac2024490d5832cb154989d0264bbdfe026ea3679a7d7761df1529ca7a1f8 /tmp/aluminum/psi_0006.bin
52795c7d53fdeb92369e4b40cc75860fee85425580666f9f397cbd86aed72c52 /tmp/aluminum/psi_0007.bin
2236971b718988a447a3cff9ccb2fda9e9678a9db41ce0cc39465c217b672f3f /tmp/aluminum/psi_0008.bin
2970ddd2d18025e3514457988486b910aff418b10b5d598a9fccbe02f26e6364 /tmp/aluminum/psi_0009.bin
1bd6c2f3ea3a1f3ce2c2366ea0d05431848c0d33e5c2e9e6fd72f6d6e028d057 /tmp/aluminum/psi_0010.binMatching again. I'm not able to reproduce the problem.
Restart is not working, at least not for aluminum model. Fix it and write unit test to make sure it works.