Hello,
I am trying to use nideconv. I started first with the example online here : https://nideconv.readthedocs.io/en/latest/ . I keep getting an error message related to rf.plot_model_fit() as below. I created a nideconv environment as can be seen in my home directory but I still cannot resolve the panda's dependency (it seems!). My understanding is that the version of panda needed is in there. e
What is the fix for this?
Thanks for any help you can provide
best
Paul
Traceback (most recent call last):
File "", line 1, in
File "/home/urmc-sh.rochester.edu/pgeha/nideconv_env/lib/python3.11/site-packages/nideconv/response_fitter.py", line 499, in plot_model_fit
signal = self.get_original_signal(melt=True)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/urmc-sh.rochester.edu/pgeha/nideconv_env/lib/python3.11/site-packages/nideconv/response_fitter.py", line 484, in get_original_signal
.melt(var_name='roi',
^^^^^^^^^^^^^^^^^^^^
File "/home/urmc-sh.rochester.edu/pgeha/nideconv_env/lib/python3.11/site-packages/pandas/core/frame.py", line 9942, in melt
return melt(
^^^^^
File "/home/urmc-sh.rochester.edu/pgeha/nideconv_env/lib/python3.11/site-packages/pandas/core/reshape/melt.py", line 54, in melt
raise ValueError(
ValueError: value_name (signal) cannot match an element in the DataFrame columns.
Hello, I am trying to use nideconv. I started first with the example online here : https://nideconv.readthedocs.io/en/latest/ . I keep getting an error message related to rf.plot_model_fit() as below. I created a nideconv environment as can be seen in my home directory but I still cannot resolve the panda's dependency (it seems!). My understanding is that the version of panda needed is in there. e What is the fix for this?
Thanks for any help you can provide
best Paul
Traceback (most recent call last): File "", line 1, in
File "/home/urmc-sh.rochester.edu/pgeha/nideconv_env/lib/python3.11/site-packages/nideconv/response_fitter.py", line 499, in plot_model_fit
signal = self.get_original_signal(melt=True)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/urmc-sh.rochester.edu/pgeha/nideconv_env/lib/python3.11/site-packages/nideconv/response_fitter.py", line 484, in get_original_signal
.melt(var_name='roi',
^^^^^^^^^^^^^^^^^^^^
File "/home/urmc-sh.rochester.edu/pgeha/nideconv_env/lib/python3.11/site-packages/pandas/core/frame.py", line 9942, in melt
return melt(
^^^^^
File "/home/urmc-sh.rochester.edu/pgeha/nideconv_env/lib/python3.11/site-packages/pandas/core/reshape/melt.py", line 54, in melt
raise ValueError(
ValueError: value_name (signal) cannot match an element in the DataFrame columns.