What happened to the RETRO filter?

VUmcCGP / wisecondor

WISECONDOR (WIthin-SamplE COpy Number aberration DetectOR): Detect fetal trisomies and smaller CNV's in a maternal plasma sample using whole-genome data.

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What happened to the RETRO filter? #8

Closed wyleung closed 10 years ago

wyleung commented 10 years ago

Hi Roy,

Is the RETRO filter deprecated now? I cannot find this script in your repository.

rstraver commented 10 years ago

Hi,

The RETRO filter was merged into consam.py to save a lot of unnecessary writing and reading of files, see the options and the flush function in there.