Valdes-Tresanco-MS / AMDock-win

(Windows) AMDock: Assisted molecular docking with AutoDock4 and AutoDockVina
GNU General Public License v3.0
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keep non_standard residues (HEME group) #8

Closed marioernestovaldes closed 4 years ago

marioernestovaldes commented 4 years ago

when processing cytochrome P450, heme group is deleted. The heme group doesn't appear in the AMBER force field. It's necessary to specify CHARMM force field for PDB2PQR

change HEME name in CHARMM.DAT file to HEM (as appear in the PDB)