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VanLoo-lab / CAMDAC

GNU General Public License v3.0
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Could now apply CAMDAC into WGBS bam file? #4

Closed guobin8216 closed 1 year ago

guobin8216 commented 1 year ago

Hi, dear guys, @NMNS93 @elarosecadieux ,

I have read your CAMDAC user manual, and I think it a very powerful tool for DNA methylation analysis. So I am extremely excited and want to hand my data using CAMDAC as soon as possible. However, my data are WGBS's bam file. So you mentioned "This flag will become relevant in future CAMDAC versions compatible with WGBS data." in the CAMDAC user manual, I wonder that now could we apply CAMDAC into WGBS bam data? If okay, how should I do to let it work well?

guobin8216 commented 1 year ago

Looking forward to your reply! Thanks Bingo

elarosecadieux commented 1 year ago

Hi Bingo, @NMNS93 has written a WGBS adaptation. Please checkout the 'wgbs' branch. Cheers, Lili