VectorInstitute odyssey issues

VectorInstitute / odyssey

A toolkit for developing foundation models using Electronic Health Record (EHR) data.

https://vectorinstitute.github.io/EHRMamba

Apache License 2.0

23 stars 6 forks source link

issues

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[pre-commit.ci] pre-commit autoupdate

#94 pre-commit-ci[bot] closed 4 days ago
0
Fix issues with EHRMamba2

#93 Adibvafa closed 2 days ago
1
Add NDJSON loading script and update database connection settings

#92 zzadxz opened 1 week ago
2
Bump lightning from 2.2.0 to 2.3.3

#91 dependabot[bot] closed 1 week ago
0
[pre-commit.ci] pre-commit autoupdate

#90 pre-commit-ci[bot] closed 1 week ago
0
Bump actions/checkout from 4.2.1 to 4.2.2

#89 dependabot[bot] closed 1 week ago
0
Bump actions/setup-python from 5.2.0 to 5.3.0

#88 dependabot[bot] closed 1 week ago
0
Add support for EHRMamba2

#87 Adibvafa closed 1 week ago
0
Bump actions/checkout from 4.2.0 to 4.2.1

#86 dependabot[bot] closed 2 weeks ago
0
[pre-commit.ci] pre-commit autoupdate

#85 pre-commit-ci[bot] closed 2 weeks ago
0
before running collect.py

#84 2533245542 opened 1 month ago
2
Add new forecasting features and support for MEDS training

#83 Adibvafa closed 1 month ago
1
Bump actions/checkout from 4.1.7 to 4.2.0

#82 dependabot[bot] closed 1 month ago
0
[pre-commit.ci] pre-commit autoupdate

#81 pre-commit-ci[bot] closed 1 month ago
0
[pre-commit.ci] pre-commit autoupdate

#80 pre-commit-ci[bot] closed 1 month ago
0
How to reproduce Table 1

#79 jameszhou-gl closed 1 month ago
2
[pre-commit.ci] pre-commit autoupdate

#78 pre-commit-ci[bot] closed 2 months ago
0
[pre-commit.ci] pre-commit autoupdate

#77 pre-commit-ci[bot] closed 2 months ago
0
Bump actions/setup-python from 5.1.1 to 5.2.0

#76 dependabot[bot] closed 2 months ago
0
[pre-commit.ci] pre-commit autoupdate

#75 pre-commit-ci[bot] closed 2 months ago
0
[pre-commit.ci] pre-commit autoupdate

#74 pre-commit-ci[bot] closed 2 months ago
0
Bump pypa/gh-action-pip-audit from 1.0.8 to 1.1.0

#73 dependabot[bot] closed 2 months ago
0
Bump aiohttp from 3.9.5 to 3.10.2

#72 dependabot[bot] closed 2 months ago
0
[pre-commit.ci] pre-commit autoupdate

#71 pre-commit-ci[bot] closed 3 months ago
0
Bump torch from 1.13.1 to 2.2.0

#70 dependabot[bot] closed 3 months ago
1
[pre-commit.ci] pre-commit autoupdate

#69 pre-commit-ci[bot] closed 3 months ago
0
Bump sentry-sdk from 2.3.1 to 2.8.0

#68 dependabot[bot] closed 3 months ago
0
[pre-commit.ci] pre-commit autoupdate

#67 pre-commit-ci[bot] closed 3 months ago
0
Bump actions/setup-python from 5.1.0 to 5.1.1

#66 dependabot[bot] closed 3 months ago
0
Bump zipp from 3.18.2 to 3.19.1

#65 dependabot[bot] closed 3 months ago
0
[pre-commit.ci] pre-commit autoupdate

#64 pre-commit-ci[bot] closed 4 months ago
0
Bump certifi from 2024.2.2 to 2024.7.4

#63 dependabot[bot] closed 4 months ago
0
[pre-commit.ci] pre-commit autoupdate

#62 pre-commit-ci[bot] closed 4 months ago
0
[pre-commit.ci] pre-commit autoupdate

#61 pre-commit-ci[bot] closed 4 months ago
0
Refactor dataset.py to use standard practices.

#60 Adibvafa closed 4 months ago
3
Add ignore to docstring to be compatible with HF

#59 amrit110 closed 4 months ago
0
Bump urllib3 from 2.2.1 to 2.2.2

#58 dependabot[bot] closed 4 months ago
0
[pre-commit.ci] pre-commit autoupdate

#57 pre-commit-ci[bot] closed 4 months ago
0
Fix issues with EHRMamba generation

#56 Adibvafa closed 4 months ago
1
Bump actions/checkout from 4.1.6 to 4.1.7

#55 dependabot[bot] closed 4 months ago
0
[pre-commit.ci] pre-commit autoupdate

#54 pre-commit-ci[bot] closed 5 months ago
0
[pre-commit.ci] pre-commit autoupdate

#53 pre-commit-ci[bot] closed 5 months ago
0
Added Mamba Config

#52 Adibvafa closed 5 months ago
0
Updated readme and notebook files

#51 Adibvafa closed 5 months ago
0
Implemented EHRMamba

#50 Adibvafa closed 5 months ago
0
Update README.md

#49 Adibvafa closed 5 months ago
0
[pre-commit.ci] pre-commit autoupdate

#48 pre-commit-ci[bot] closed 5 months ago
0
Update README.md

#47 Adibvafa closed 5 months ago
0
Update README.md

#46 Adibvafa closed 5 months ago
0
Update readme

#45 amrit110 closed 5 months ago
0