Closed VeroIarrachtai closed 4 years ago
The error seems to be that:
>
in the sed
command. *countgenes.txt
files in the path metadata/count_genes
You were right!!! the code line had wrong files' address
do awk '{ sub(/^[ \t]+/, ""); print }' ../../data/TXT/${f}_sw10L50.countgenes.txt | sed 's/ /\t/' > ../../data/TXT/${f}_sw10L50.genesorder.txt;
I have issue with my script 5.1_Count_genes_bamfile.sh I can't run this part, but before I didn't have any problem.
The error I get is: