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Victorian-Bioinformatics-Consortium / degust

Deprecated : Use https://github.com/drpowell/degust
GNU General Public License v3.0
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Enhancement: QC: Find outliers #36

Open AMChalkie opened 7 years ago

AMChalkie commented 7 years ago

For QC I want to see if others would find this useful: I think it would be nice to see all genes where one replicate is a large distance from the others. So if you have values of 100,100,8000 for a given gene in a given condition it would be useful to highlight this. My reasoning is that if a sample has a a few of these it might point to problems in sample prep/sex matching.

drpowell commented 7 years ago

I think you find these best with the MDS plot - and looking at the new "Gene" plot when hovering on genes.